Pairwise Alignments

Query, 1087 a.a., Multidrug transporter AcrB from Rhodanobacter sp. FW510-T8

Subject, 1045 a.a., Multidrug efflux pump subunit AcrB from Paraburkholderia bryophila 376MFSha3.1

 Score =  301 bits (771), Expect = 2e-85
 Identities = 274/1076 (25%), Positives = 491/1076 (45%), Gaps = 65/1076 (6%)

Query: 13   ARAFQDSPLTPILAIAALLLGLVAVMITPREEEPQIDVTMANVMVPFPGADVRDVENLVA 72
            A A ++  +T  L     L GL++     R E+P   + +  ++  +PGA  +++ + VA
Sbjct: 10   ALAVRERSITLFLICLISLAGLLSFFKLGRAEDPAFTIKVMTIVSVWPGATAQEMHDQVA 69

Query: 73   FPLEQKLAEIEGVKHVYSVSRPGMAVMTVEFQVGVPRQAAIVRLYNQVFQNQGFVPPGLG 132
              +E+++ E+       + +RPG+A  T+      P        Y Q  +  G     L 
Sbjct: 70   EKIEKRMQELRWYDRTETYTRPGLAFTTLTLLDSTPPSEVQEEFY-QARKKIGDEAANLP 128

Query: 133  VGPPLVRPMGIDDVPVMALTLWSDLPAQGPVQ--LAEVAHTLETELKRVPGTRDVYTIGA 190
             G  ++ PM  D+   +   L++ L A+G  Q  L     TL   L  VPG + V  IG 
Sbjct: 129  AG--VIGPMVNDEYADVTFALFA-LKARGEPQRLLVRDGETLRQRLLHVPGVKKVNIIGE 185

Query: 191  PARAVVVELDAAKLAAYGMTPGDLSNALKAANAVSQAGDRVGGERDVPVTAGRFLADAAE 250
             A  + V+    +LA  G++P D+  AL   NA++ AG       +V +       +  +
Sbjct: 186  QAERIYVQFSHDRLATLGVSPQDVFAALNGQNALTPAGSVETKGPEVFIRLDGAFDNLQK 245

Query: 251  VSQLVIGLKNGQPVFLSDVATIRQGADLPDSYAWFGAPAGKAGPATGNAPAVTIAVAKKP 310
            +    + ++ G+ + LSD+AT+ +G + P ++                 PA+ + +  + 
Sbjct: 246  IRDTPVVVQ-GRTLKLSDIATVERGYEDPATFLI----------RNNGEPALLLGIVMRD 294

Query: 311  GTNAADITGAIRRRLDALQGVAIPAGVHVAVTRDYGQTATDKADKLIHKLIFATLSVVLL 370
            G N  D+  A+   + A+ G  +P G+ +    D         D+ + K   A L V+ +
Sbjct: 295  GWNGLDLGKALDSEVGAING-GLPLGMSLTKVTDQAVNIHSAVDEFMLKFFVALLVVMFV 353

Query: 371  VLLALSWRAAVVVGSAVIVTLALTLFASWAMGFTINRVSLFALIFSIGILVDDAIVVVEN 430
              +++ WRA +VV +AV +TLA+      A G   +R++L +LI ++G+LVDDAI+ +E 
Sbjct: 354  SFVSMGWRAGLVVAAAVPLTLAVVFVVMAATGKNFDRITLGSLILALGLLVDDAIIAIEM 413

Query: 431  IHRHMALGGRTLREAIPEAVGEVGGPTILATFTVIAALLPMAFVSGLMGPYMRPIPINAS 490
            +   M  G   +  A   A      P +  T       +P  F     G Y   +     
Sbjct: 414  MVVKMEEGYSRV-AASAYAWSHTAAPMLSGTLVTAVGFMPNGFARSTAGEYTSNMFWIVG 472

Query: 491  AGMLLSLAVALVVTPWLALRLLGHGHPAGEAATAAAHESAGGWLPRL--FQRVMTPFLHG 548
              ++ S  VA+V TP+L +++L       +    A +++     PR   F++V+T  +  
Sbjct: 473  IALIASWVVAVVFTPYLGVKMLPDFKKV-DGGHDAIYDT-----PRYNRFRQVLTRVI-- 524

Query: 549  DRAPRRRRRLFAVMGLLVLAAVGLVVVKAVVLKMLPFDNKSEFQVVVDMPEGSTLERTNR 608
                R+     +V+ L  LA +G+ VVK    +  P  ++ E  V V MP G+++ +T+ 
Sbjct: 525  ---ARKWLVAGSVVALFALAILGMGVVKK---QFFPISDRPEVLVEVQMPYGTSISQTSA 578

Query: 609  LLGELAQAVAEVPEVKDWQGYAGTAAPITFNGLVRQYYLRSGPIVGDLQ-VSLVDKHERQ 667
               ++   ++   E +    Y G  AP        +++L  GP + D     +V + + Q
Sbjct: 579  ASQKVEAWLSGQKEARIVTAYVGQGAP--------RFFLAMGPELPDPSFAKIVIRTDSQ 630

Query: 668  RQSHAIALAVRPALAKIGARYGASVKVVEVPPGPPVLAPIVAEVYGPDYATVRKVALGLE 727
             +  A+   +R A+A  G    A V+V ++  GP    P+   V GPD   +R +A  +E
Sbjct: 631  EERDALKARLRRAIAD-GLVPEARVRVTQLVFGPYSPFPVAYRVTGPDPDKLRGIAAEVE 689

Query: 728  RDFKANPDIVDVDTSVEAQAPRDVLVVDRARAARLGLDQAAIAQALRTALSGDDASYLMD 787
            R  +A+P +  V+T    ++P    V+ + R   +GL  +A+AQ L+  L+G   + + +
Sbjct: 690  RVMQASPMMRTVNTDWGTRSPALHFVLQQDRLQAVGLTSSAVAQQLQFLLTGTPVTAVRE 749

Query: 788  GHAKYAVPIRLRLGAGD-QAAMSQLLALRVRARGGALVPLSEVVAVQPAQREQAIWHKDL 846
                  V  R    AGD +   ++L    +    G  +PLS+V  V     E     +D 
Sbjct: 750  DIRTVQVIAR---SAGDVRLDPARLGDFTLAGATGQRIPLSQVGKVDVRMEEPISRWRDR 806

Query: 847  LPYATVTGDDAGATDSPLYGMFSLVGKLGHDKVAGQLLQQHFIAQPTDTTDASVKWDGEW 906
            +P  TV GD A     P               +  QL  Q  IA+    +   ++  G  
Sbjct: 807  VPTITVRGDIADNLQPPDVS----------TAITTQL--QPIIAKL--PSGYRIEQAGSI 852

Query: 907  QITYETFRDMGLAYSAGLLLIYLLVVGQFRSYVVPLIIMAPIPLTVIGVMPGHALVGAQY 966
            + + +    M   +   L +  ++++ Q RS    +++    PL +IGV+P   L G  +
Sbjct: 853  EESAKATTAMLPLFPIMLAITLVIIIFQVRSISAMVMVFMTSPLGLIGVVPTLILFGQPF 912

Query: 967  TATSMIGMIALAGIIVRNSILLIDFINHALAAGQPLREAVIDAAAVRAKPIVLTGVAAMI 1026
               +++G+IAL+GI++RN+++LI  I+    AG     AV++A   RA+P++LT +AA++
Sbjct: 913  GINALVGLIALSGILMRNTLILIGQIHQNENAGLDPFNAVVEATVQRARPVILTAMAAIL 972

Query: 1027 GGFFIIDDPIFQG-LAVSLIFGILVSTALTLLVIPLLYYAWLQRRVGPDGRLSQAP 1081
              F  +   +F G LA +LI G    T LTL+ +P ++  W + R G      ++P
Sbjct: 973  -AFIPLTHSVFWGTLAYTLIGGTFAGTILTLVFLPAMFAIWFKIRPGSPAGAHKSP 1027