Pairwise Alignments

Query, 731 a.a., M3 family peptidase from Rhodanobacter sp. FW510-T8

Subject, 726 a.a., peptidyl-dipeptidase Dcp (RefSeq) from Shewanella loihica PV-4

 Score =  616 bits (1588), Expect = e-180
 Identities = 327/728 (44%), Positives = 457/728 (62%), Gaps = 17/728 (2%)

Query: 4   PVALALAIALSSGSLAACSDAGSDKKNAAAPQAQASVVVAD-AGNPFFSESPLPLHYPQF 62
           P+  A+A+A++ G  +A    GS ++   AP A A  ++ + A NPFF      L  P F
Sbjct: 8   PIVSAMALAIALGGCSA--QQGSSQQAEVAPNAVAQRIIDNNASNPFFKPYDTFLGMPDF 65

Query: 63  DKIRDSDFAPGFDRGMAEHLKEVQAVADAAEAPTFDNTIVALEKSGQILSRTSTAFFSLV 122
           DKI+   + P F  G+A+H  E+QA+ D   APTF NTI A+E +G + ++ ++ F++L 
Sbjct: 66  DKIKPEHYLPAFKAGIAQHKAEIQAIIDNPAAPTFANTIEAMEFAGDLTTKVASVFYNLT 125

Query: 123 GVDINDARKAIQAEYAPKLAAHRDAISLNPKLFARIQQLYDTRDSLGLDAEGVRLVERYH 182
             D N+  +AI  E +P L+A  D I LN +LF R++ +YD RDSL L+    +L+E  +
Sbjct: 126 SADTNEQLQAISKEVSPMLSAAGDDILLNDQLFKRVKAVYDQRDSLALNTAQQKLLEDTY 185

Query: 183 TDFVRAGARLSDADKAHLKEINGELAKLGTRFSQNVLAEVNDSALVVDTKEELAGLTDEQ 242
             F R GA LSDADK  L+ +N ++ KL   F  N+LAE N   LV+D   +L GL  + 
Sbjct: 186 KSFTRGGANLSDADKVKLRALNEKIGKLSLEFGDNLLAETNAFELVIDNAADLKGLPQDV 245

Query: 243 IGAAAAAAKAKGLDGKYVIALLNTTGQPPEAQLHNRALRQRLHEASIARGSRGNAYDNTA 302
           I  AA  A+ KG  GK+V      +  P      NR LR+++++  + RG+  NA+DN  
Sbjct: 246 INTAAQTAEKKGHPGKWVFTTQRPSITPFLTYADNRELREKIYKGYVERGNNNNAHDNKK 305

Query: 303 IVAQVLKLRAEKAKMLGYPTYAAYVLADETAKTPEAVNAMLTKLAPPAVANAKREGAAIQ 362
           I+AQ+  LRAE+A+++GY ++A +VL + TAKTPE V  +L K+ P A+  AK E A +Q
Sbjct: 306 ILAQMAALRAERAQLMGYKSHAHFVLEERTAKTPENVYGLLDKVWPAALGQAKAEVAVMQ 365

Query: 363 AMIDKEQKAKGEPTFALQPWDWAYYTEKVRAEKYDFDESQLKPYLEMKNVLENGVFYAAG 422
            +ID E        F L  WDW YY +K+R  KY F+E + +PY  ++N L+ GVFY A 
Sbjct: 366 ELIDAE-----GGNFKLAAWDWWYYADKIRVAKYSFNEQETRPYFSLENTLK-GVFYTAN 419

Query: 423 QLYGLSFKQRTDLPVYNPDVLVYDVYNADGSQLAIFLADMYARPSKRGGAWMNSYVEQSA 482
           +LYG++ K+RTDLP YN +V  ++VY+ DGS +AIFL D Y R SKRGGAW N+Y +Q  
Sbjct: 420 RLYGITVKERTDLPKYNDEVRTWEVYDKDGSLMAIFLGDYYVRDSKRGGAWANAYRKQYR 479

Query: 483 LTG--NLPIVANHLNITKPASG-PTLLTWTEVTTMFHEFGHALHGMFSNVKYPYFSGTSV 539
           + G  + PI+ N LN  +P    P LLT+ E +T+FHEFGHALH M S+V+Y   +GTSV
Sbjct: 480 MHGVESKPIIVNVLNYPRPVGDEPALLTFDEASTLFHEFGHALHAMLSDVEYRSQAGTSV 539

Query: 540 PRDFVEFPSQVNEMWSDWPSVLANYAKHYQTGAPMPKALLDKVLATSKFNQGFTTTEYLG 599
           PRD+VEFPSQV E W   P VLA +AKHY+TG  +P++L++K+ A SKFNQGF T EY+ 
Sbjct: 540 PRDYVEFPSQVMENWMTQPEVLAQFAKHYKTGEVIPQSLVEKIQAASKFNQGFATVEYMA 599

Query: 600 SAMLDQSWHQIGADKIPAAGGVVAFEAAALKANGTDYAPVPPRYRTPYFSHIMS-GYAAG 658
           +  LD  WH + +D  P       FEA +L   G     + PRYR+ YFSHI S GY+AG
Sbjct: 600 ATKLDLDWHTL-SDFEPK--DAAKFEADSLSKMGL-IEEIAPRYRSTYFSHIFSGGYSAG 655

Query: 659 YYAYIWSEVLDANTVEWIKANGGLTRANGDRFRATLLSQGGSKDALQLFRDFAGHEPQIE 718
           YY+Y+WS++L A+  E  K NG   +A  D FR  +LSQGGS+D + L++ F G E  IE
Sbjct: 656 YYSYLWSDILGADAFEAFKENGIFDKATADAFRNNVLSQGGSEDPMLLYKQFRGKEAGIE 715

Query: 719 PLLKRRGL 726
           PLL+ RGL
Sbjct: 716 PLLRSRGL 723