Pairwise Alignments

Query, 830 a.a., GGDEF and EAL domain-containing protein from Rhodanobacter sp000427505 FW510-R12

Subject, 878 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  328 bits (842), Expect = 6e-94
 Identities = 211/581 (36%), Positives = 307/581 (52%), Gaps = 25/581 (4%)

Query: 252 QDISQRKAFEDALHRERELAEVTLRSIGDAVITTDPQLCITSLNPIAEAMTGWSGLEAQG 311
           ++IS+ K  E+ L     + + TL    + V+ TD    IT +N     +TG+S  E  G
Sbjct: 314 RNISKHKEVEEQLTLATNVFKHTL----EGVVITDRHGNITDVNGAFYEITGYSREELLG 369

Query: 312 RPIEEIFQ-------LFDARSGHAVANPLRAAISHNTIVDLAGRTLLRHRHGFDTPVEDS 364
           +    +F         FDA   H +                 G    R + G   P   +
Sbjct: 370 QN-PRLFNSGRHEKAFFDAMWNHLLETG-----------KWNGEIWNRRKDGTIFPQNIT 417

Query: 365 SAPIHDNAGNVIGGVLVFHDVSETRALALKMIHLTQHDTLTGLPNRSQLHEHIGQAIATA 424
            + I+D  G+V   V VF D+S  +    ++ HL   D LT LPNR +L   + Q +  A
Sbjct: 418 ISTIYDELGDVRYFVAVFSDISAQKQSEAQLAHLAYFDPLTHLPNRMKLMMQLKQELRHA 477

Query: 425 NRRQQRAALLYADIDNFKQVNELHGHAAGDRVLRAFAAQLQRCLSGDDLLSRYGGDEFVV 484
            R   + A ++ D+D FK +N+  GH+ GD +L   A +L+  L   D+LSR GGDEFV 
Sbjct: 478 KRLNAQLATVFIDVDLFKHINDSFGHSIGDEMLVELAKRLRSQLQEQDVLSRIGGDEFVA 537

Query: 485 VLPHLESVGDAASLGQRLINHGEQTRVDGLAE-LGLRLSIGISVYPDDAIEPDGLLQHAE 543
           ++  ++S  DAA+   +L    EQ  V    + L L  S+G+S+YPDD    D LL++A+
Sbjct: 538 LISGIQSHEDAAAAINQLRQVFEQPFVVSTGDHLRLTASMGVSIYPDDGSNADTLLRNAD 597

Query: 544 TALVAVKAQGRHGYRFFTASMNERTQARRRIETALRQALPRHELELYYQPKVDVHSGRIV 603
            A+   K++GR+ + F+T S+ +++    ++++AL  AL ++ L L YQPK+D+ S + +
Sbjct: 598 AAMYRAKSEGRNNFAFYTESLTKQSFEHLKLQSALYGALEQNALYLMYQPKLDLVSRKTI 657

Query: 604 GAEALLRWQANGRELYQPDQFVPVAEDSGLILPIGAWALRRACRQARAWQDLGHAIA-VS 662
           G EALLRW         P  F+PVAE  GLI  IG W L  AC Q   W   G     ++
Sbjct: 658 GVEALLRWNDPILGQISPGVFIPVAEKIGLIYDIGLWVLETACLQGVRWLTEGKPFGRIA 717

Query: 663 VNVSPLQFQHPEFYHWLDEVLVESGLAPGLLELELTERMVMSGGDATTGLLQRIKRRGVR 722
           VNV+  Q Q   F   +  +L ++GL    LELE+TE ++M   D     L+ +   G+ 
Sbjct: 718 VNVAGQQLQRSSFVEDVKRILTQTGLPATCLELEVTESVMMHNPDVAIRDLKLLGDLGIE 777

Query: 723 LSLDDFGTGYCSLSYLKHFPIDTLKIDRVFVRDLASDRDTATITSAIIAMARSLNKEVVA 782
           LS+DDFGTGY SL+YLK  PI  LKID+ FVRD+  D +   I  A+IA+  +L  E+VA
Sbjct: 778 LSVDDFGTGYSSLNYLKKLPIHKLKIDQSFVRDIPFDTNNTAIAKAVIALGHALKLEIVA 837

Query: 783 EGVETHAQVAFLRQAGCSQLQGFLFGAALPAAEFQALLTGA 823
           EGVET AQ  FL Q  C Q QG+LF   L  A+ +A L  A
Sbjct: 838 EGVETQAQAEFLTQNLCDQAQGYLFSRPLLPADVEAFLAKA 878



 Score = 40.8 bits (94), Expect = 3e-07
 Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 7/157 (4%)

Query: 109 PDFDAGGRVCGIFTALVDITERHDLELKLHESEQRFFGAFQHAAIGMALVAPDSRWLRVN 168
           P   + G + G+     +I++  ++E +L  +       F+H   G+ +         VN
Sbjct: 298 PAMTSEGALAGVIGMTRNISKHKEVEEQLTLATN----VFKHTLEGVVITDRHGNITDVN 353

Query: 169 AALCAMLGYREDEFLSRKTRDITHP-DDVATSDMRHAQMLEGELESCHLEKRYFHRNGSL 227
            A   + GY  +E L +  R       + A  D     +LE    +  +  R   ++G++
Sbjct: 354 GAFYEITGYSREELLGQNPRLFNSGRHEKAFFDAMWNHLLETGKWNGEIWNR--RKDGTI 411

Query: 228 VHAQLSVSLVRDDDGSPRYFVVQIQDISQRKAFEDAL 264
               +++S + D+ G  RYFV    DIS +K  E  L
Sbjct: 412 FPQNITISTIYDELGDVRYFVAVFSDISAQKQSEAQL 448