Pairwise Alignments

Query, 602 a.a., GGDEF domain-containing protein from Rhodanobacter sp000427505 FW510-R12

Subject, 544 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  111 bits (277), Expect = 9e-29
 Identities = 61/159 (38%), Positives = 88/159 (55%), Gaps = 2/159 (1%)

Query: 423 ARRDGLTDIFNRQHFINEAEQQLQYCRKSGREACLVLIDLDHFKAVNDTYGHAVGDRVLK 482
           A RD LT + N    +  A   +   +++    C+ ++DLDHFK VNDTYGH+ GD+VL 
Sbjct: 381 ASRDSLTGLLNHTQILVAARHCINLAKRANSSVCIAMLDLDHFKQVNDTYGHSGGDKVLL 440

Query: 483 RAVAACQAHLRSTDIFGRLGGEEFGIVLPECTLEQVLARTERIRLAIVE-VCGDAAEEIC 541
                 Q  LR+ D  GR GGEEF +V+P+     V+A+   IR +    V  +   E  
Sbjct: 441 AFAHLLQQSLRAADFMGRYGGEEFMLVIPDMPAPLVIAKVNAIRESFSNIVFVEEGAEFK 500

Query: 542 VSASFGVATTKHSGHDLRQLLIHADDALYRAKREGRNRV 580
           V+ S G+A +    H+ ++ L+ AD  LY AKR GRNR+
Sbjct: 501 VTLSGGLAFSTEC-HEFQECLLLADKNLYEAKRTGRNRI 538