Pairwise Alignments

Query, 284 a.a., AraC family transcriptional regulator from Rhodanobacter sp000427505 FW510-R12

Subject, 275 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

 Score =  130 bits (326), Expect = 4e-35
 Identities = 93/281 (33%), Positives = 133/281 (47%), Gaps = 19/281 (6%)

Query: 1   MDELSELMRHLRLQTRVFHRTTHCGQWVVDGEYERKAMFHLVATGRCVMRYDGHAGDIL- 59
           MD LS L+ H RL    ++    CG    DG  +R+   HL+  GR  ++    A  +L 
Sbjct: 1   MDRLSALLTHFRLHATTYYSGGLCGTAEYDGR-DRQGHLHLLRAGRVRIQ----AERLLV 55

Query: 60  --LRAGDAVLFNRPVDHCLIASLGADGDVPTLLLCGYFEFDSPLSEVLLASLPAQLLLRH 117
             +     +LF RP  H LIA      +    L+C    FD  +   L  +LP  LLL  
Sbjct: 56  YEIEEPTLILFPRPAPHALIADTADHAE----LVCASLTFDGGIDNPLTLALPGHLLLPL 111

Query: 118 DPQPGGGDSGAPAALLQLIVAEAESNGPGAMALMDKLSDALFMYALRQCLAAGTVAQGLL 177
              P        A  L+ +  EA +   G  A++++L + + +  LR  LA  T++ GL+
Sbjct: 112 SQLPN------LAGNLEWLFQEAFNEECGRFAVLNRLFELMLIQLLRHLLATRTLSTGLM 165

Query: 178 TAIFDPHLGPALLAIHQDPQQPWTVAMLADRVHLSRAAFARRFAHSTGATPMGYVTGLRM 237
             + DP L  AL  +H  P Q W+V  LA   ++SRA FA RF    G+TP  Y+ G R+
Sbjct: 166 AGLADPRLARALTLMHDAPHQAWSVETLAQACNMSRAGFAARFHEIVGSTPADYLRGWRV 225

Query: 238 QQAKSALAERGVSVAEAAVIAGYATEAAFSRAFKRLHGYSP 278
                 L E G  +A  A   GY + +A SRAF+R  G SP
Sbjct: 226 SLVLKRLRE-GRPIALIADEVGYESPSALSRAFRRKVGKSP 265