Pairwise Alignments

Query, 1169 a.a., chromosome segregation protein SMC from Rhodanobacter sp000427505 FW510-R12

Subject, 1189 a.a., chromosome segregation protein SMC from Methanococcus maripaludis S2

 Score =  242 bits (617), Expect = 1e-67
 Identities = 267/1227 (21%), Positives = 542/1227 (44%), Gaps = 119/1227 (9%)

Query: 3    LTTIKLAGFKSFVDPTTLHLPSNMIGVVGPNGCGKSNIIDAIRWVMGESAASRLRGDSLT 62
            L+ I +  FKSF + + L +P     ++GPNG GKSN ID I +V+G+++A  LR     
Sbjct: 4    LSEIHMKNFKSFKN-SKLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLRAGKFN 62

Query: 63   DVIFSGSNTRKPVGQATVELIFDNADGSIQGEYGQYAEISVKRQVTRDGQSAYFL----- 117
             +I   +  R+   + T  LIFDN D  +  +  +   + + R+V  +G + Y+L     
Sbjct: 63   QLITYHNGKRENFAEVT--LIFDNKDRKMPVDSDK---VGISRKVKINGDNNYYLIWNEE 117

Query: 118  -----NGA----------RCRRRDITDLFLGTGLGPRSYSIIEQGMISQIIEAHPEELRT 162
                 NG           + ++ +I D+     L    ++II QG + +II+  P E R 
Sbjct: 118  KEVKENGEIKTVKEEKRKKVKKSEILDVIGKISLSADGFNIILQGDLIKIIDTTPNERRK 177

Query: 163  HLEEAAGISKYKERRKETESRIKATRENLDRVKDVRDEVDKQLEHLHRQARAAERWKALK 222
             ++E +G++++ E+ ++ +  ++  RE ++++    +EV   LE L ++   AE    L 
Sbjct: 178  IIDEISGVAEFDEKGEKAKKELEKAREFIEKIDIRINEVKNNLEKLKKEKEDAETHVKLT 237

Query: 223  EE--QTRKEAELRALEY-RGLKSQHDGEGEVLSAAEIEIEKQLAGQRQIEAQLESVRERH 279
            EE   T+     + +E+  G+  +   E E L   ++   K+++   + +A+   +R R 
Sbjct: 238  EELKATKYILTSKKIEFLNGILEKTKEEIEALKEMKVCFLKEIS---EYDAKSNDIRNRL 294

Query: 280  TDASEHLNAV-QAEVYKVGAEIARVEQQVRYNKETA----ERLQRAHGDAEREHAELAAH 334
             +    LN     E+ ++   I  +E  V  +K++     + L+  +  +E++  +L   
Sbjct: 295  QNLINELNEKGNEEIMELHKSIKEMEVTVDNDKKSLNGALDDLKNVNSQSEKKGQDLVE- 353

Query: 335  IATDRDQVEALRLALAEGEPKLEALQQLQDDTAEAQRSTEAKLADWQQRWDSHTRNAGES 394
                R ++E +R    + E ++ AL+   ++    ++  ++K+ + + + +   +   + 
Sbjct: 354  ---TRQKIETIRTETLQKEAEINALKTEMENLETEKKKLKSKVEESETQTEILKQQERKL 410

Query: 395  NRAAEVERTKL-----------NYLDRQAIDLSRRREALEAEQKATDVAALDAAGQQLVD 443
            +      + +L           N +++++ +L++ +E +E  QK  +         ++  
Sbjct: 411  SERINESQNELYNFKNEFNALENEINKKSFNLAKNKETIETLQKELE---------EIRS 461

Query: 444  EHETQR---ERVETLGSLLDQHKGGHEKLLEEERQVQSALNEARQQLQAARGRQASLEAL 500
            EHE  +   + +E +   L+  K     LLE +++ Q  L+++         +  +++ +
Sbjct: 462  EHEDTKSLYKELEDVAVELEYSKKKVVTLLENKKEYQDRLDKSHADYIKENAKIKAMKDM 521

Query: 501  QHAALGQEENAASGWLARLGLNKSRRLGESLQVENGWETAVETALSGFLDSVLV----DG 556
            +  +L +   +         ++ +  LG++   +  ++TA+E A    L+ ++V    DG
Sbjct: 522  EDFSLDRAVKSVLEAKLPGVVDIAGNLGKT---DAEYKTAIENAGGNRLNYIVVKRMDDG 578

Query: 557  SHALA------------AEFEALENADVALLDAADGGAHTAGTLAAHVRGPAAALTILGH 604
            + A+                + +   +   LD           +            + G+
Sbjct: 579  ARAIQYLKKNNLGRTTFLPLDRINGPEALYLDDEGVVGRAIDLVEFKPEHENLFRYVFGN 638

Query: 605  VLTAESLGDAHQQVASLSALAPYQSVITRSGEWLGPGWARV--RRAQGSQVGVLAREREL 662
             +  E+L  A  +  S    A +   +T  GE + P  A +  R  + S + V     +L
Sbjct: 639  TIIVENLDYA--KTLSKDHRARF---VTLEGEVIEPSGAMIGGRSRKKSVIKVDIDTSKL 693

Query: 663  RLLAEQIAALEAQLETSSERLDALRISKFEAERARDDAQRELYNAHRRQSELAGQLQSHR 722
              LAE I+ L+  L  + + ++ L+         + + +  L      + +  G L ++ 
Sbjct: 694  EKLAEDISELDGTLSETKDEIERLQNKNATYSTRKMELESRLKIIKDLEHKKEGILTNNG 753

Query: 723  GKLETARARAEKVSGELDGLAAQLDELQGQTRE----------ARARLDESVGLMGDQED 772
             K++     + K+  ELD L    +EL+ +  E           R R+ E +    + E 
Sbjct: 754  VKIKELELESRKLEEELDYLEGSKEELERKIEEFTKKISGFTSQRDRISEEIASFENSEH 813

Query: 773  QRR-ELENERRTLLEAREEARMNAREAAEQSHALALALESKRSSLGSLEQALGRMDAQLR 831
             +R ++ +E     E ++    N  E    +  +   L  K S L S  + L      L 
Sbjct: 814  SKRIKVIDENIIAFEKKKNEFEN--EIKRDAVLIKEVLIPKISELNSNIKELSEKRTILE 871

Query: 832  Q-IEARRDEISEQLAAGSDPIAELEAERQAYLDQRLLVDKQLVEARRALEDCDLEFRKLE 890
            Q I+  ++ + +        I + + ER   L + L   ++L E + A E  +LE    E
Sbjct: 872  QNIQFYKNNVEKNFE-----ILKNKKERYEDLTKDL---RELTEKKEAFEK-ELEILNGE 922

Query: 891  QQRHLAE--QGLASLREGLSEKRLAAQALQLRAEQLAAAINASGLELETLLTELAADIDA 948
            ++R      Q  + +     +K      L+    +L    N   +  +  +T    + D 
Sbjct: 923  KRRVYGRINQNESQINSLSIDKAKYETRLEEEDRKLYVCENIEQISED--ITSKIKEFDV 980

Query: 949  EQWRAQLGDLGQKIARLEPVNLAAIQEHAEQSERKTYLDNQLADLTSAMETLENAIKKID 1008
            +   +   DL   I +LEPVN+ AI ++    +R   L  +  D  +  +   + I+++ 
Sbjct: 981  DALESHQIDLEGHIKKLEPVNMRAIDDYQYIVDRYDELFEKRTDYENEEKKYLHLIEEVS 1040

Query: 1009 RETRQRFKETFDKVNAGVQELFPRLFGGGHAYLELTGDDLLNTGVSIMARPPGKRPSNIS 1068
            +  ++ F + + KV    ++++  + G G   LE   +D  + G+ I A P  K+  ++ 
Sbjct: 1041 KRKKEVFMDVYLKVAENYEKIYTEIGGSGKLSLE-NPEDPFSGGLLIDASPMNKKLQSLD 1099

Query: 1069 LLSGGEKALTAVSLVFAIFNLNPAPFCLLDEVDAPLDEANVGRFSNMVREMSEKVQFIFV 1128
            ++SGGEK+LTA++ +FAI +LNPAPF +LDEVDA LD  N G    M++  S+  QFI +
Sbjct: 1100 VMSGGEKSLTALAFLFAIQHLNPAPFYVLDEVDAALDTKNAGLIGEMIKNASKDSQFIVI 1159

Query: 1129 SHNKATMEAASQLCGVTMREPGVSRLV 1155
            SH +  +  +  + GV M E G+S+LV
Sbjct: 1160 SHREQMISKSDVMYGVCM-ENGLSKLV 1185