Pairwise Alignments

Query, 602 a.a., DHHA1 domain-containing protein from Rhodanobacter sp000427505 FW510-R12

Subject, 571 a.a., single-stranded-DNA-specific exonuclease RecJ from Pseudomonas stutzeri RCH2

 Score =  528 bits (1360), Expect = e-154
 Identities = 304/604 (50%), Positives = 388/604 (64%), Gaps = 45/604 (7%)

Query: 8   RRESKGAPRGWPD--SVHPVLQRIYAARGVLEPGQAEHRLARMLSPQLLGGMAQAVELLV 65
           R E +  P   PD   + P+LQR+YAARGV    + +  LAR++  + L G+  AVELLV
Sbjct: 2   RIEPRPLPEQLPDLGELPPLLQRLYAARGVTCAEELDKGLARLIPYKQLKGIDAAVELLV 61

Query: 66  EAIRDDWAILIAGDYDCDGATGTAVAVRGLRLLGARRVDYAIPNRFAHGYGLSPAFVA-S 124
           EA+     IL  GD+D DGAT + V V GLR LGA  VDY +PNRF +GYGL+P  VA +
Sbjct: 62  EALEKRQRILFVGDFDADGATASTVGVLGLRQLGAAHVDYLVPNRFEYGYGLTPEIVAVA 121

Query: 125 LQPTPQLIVTVDNGVASVAGVAAAQARGIKVIVTDHHLPGEQLPACDALVNPNVGPEKCG 184
           LQ  P L+VTVDNG++SV GVAAA+A G+KV+VTDHHLPG +LPA DA+VNPN       
Sbjct: 122 LQREPDLLVTVDNGISSVDGVAAAKAAGLKVLVTDHHLPGHELPAADAIVNPN------- 174

Query: 185 QGSPLFDSRVQDARMKNLAGVGVMFYLLLALRAKLHGQGAF---GAAKPDLSPLLDLVAL 241
           Q    F S       K +AGVGV+FY+LLALRA+L     F   G A+P+L+ LLDLVAL
Sbjct: 175 QPECAFPS-------KCIAGVGVIFYVLLALRARLRELDWFVRQGWAEPNLAELLDLVAL 227

Query: 242 GTVADLVPLDFNNRVLVEAGLQRMRSGRACAGIAALVEVGKRSLATLCSTDLAFTVGPRL 301
           G+VAD+VPLD NNR+LV  GL R+R+GRA AG+ A++EV  R    + STDL F +GPRL
Sbjct: 228 GSVADVVPLDANNRILVHQGLARIRAGRARAGLRAILEVAGRDHRRITSTDLGFILGPRL 287

Query: 302 NAAGRLEDMRLGVACLLTDDAAQARRHAEQLDAINRERRDLQASMVAEAELMAASLGHTD 361
           NAAGRL+DM LG+ CLL +D A AR  A QLD +N++R+ ++  M  EA      L   D
Sbjct: 288 NAAGRLDDMSLGIECLLCEDEALARDMAVQLDELNKDRKSIEQGMQREALAQLKDLPLED 347

Query: 362 A-VGVALFEPSWHAGVVGLVASKLKERLHRPVIAFAPAGIEECGEGSPPFDSGAQEVRTG 420
              G+ LFE  WH GV+G++AS+LKER HRP IAFA AG                     
Sbjct: 348 LPFGLCLFEADWHQGVIGILASRLKERYHRPTIAFADAG--------------------- 386

Query: 421 NTQLRGSARSIPGFHIRDALAAIDARQPGLIERFGGHAMAAGLSLKADDYPRFAAAFDAI 480
           +  L+GSARS+PGFHIRDAL A+ A+ PGLI +FGGHAMAAGLSL   ++  FAAAFDA 
Sbjct: 387 DGLLKGSARSVPGFHIRDALDAVAAKHPGLISKFGGHAMAAGLSLPQANFGAFAAAFDAE 446

Query: 481 ARELIEPERLQAVLYTDGELPPGAATLALARQLREAGPWGQAFPEPLFDNLFDCAGWKLM 540
            R  +  E L   L TDG+L      L LAR LR AGPWGQ FPEP+F  +F     +++
Sbjct: 447 VRRQLCEEDLTGRLLTDGQLSVEEFHLELARALRNAGPWGQHFPEPMFHGVFQLVQQRIV 506

Query: 541 GERHLRLQLRDPRDGAVHDAVMFNAYHGQPPPPRLR---AAYELTINDWQGRESPRLLLR 597
           GERHL+L L+        D + FN      P P +R    AY+L +N+++G+ES +L++ 
Sbjct: 507 GERHLKLVLKSECGSLTLDGIAFNVDREIWPNPTVRWAELAYKLDVNEYRGQESVQLMVA 566

Query: 598 HIEP 601
           HI P
Sbjct: 567 HIAP 570