Pairwise Alignments

Query, 602 a.a., DHHA1 domain-containing protein from Rhodanobacter sp000427505 FW510-R12

Subject, 565 a.a., single-stranded-DNA-specific exonuclease RecJ from Ralstonia solanacearum IBSBF1503

 Score =  487 bits (1253), Expect = e-142
 Identities = 285/585 (48%), Positives = 360/585 (61%), Gaps = 47/585 (8%)

Query: 22  VHPVLQRIYAARGVLEPGQAEHRLARMLSPQLLGGMAQAVELLVEAIRDDWAILIAGDYD 81
           +HPVL RI AARGV  P +    L  +L P  L G+  A   L +AI     +LI  DYD
Sbjct: 22  IHPVLARILAARGVARPSELSTELTDLLPPAQLKGIDDAARYLADAIAAGKRLLIVADYD 81

Query: 82  CDGATGTAVAVRGLRLLGARRVDYAIPNRFAHGYGLSPAFVA-SLQPTPQLIVTVDNGVA 140
           CDGAT  AV VRGLR+LGA+ V Y +PNRF +GYGLSP  VA + +  P ++VTVDNG+A
Sbjct: 82  CDGATACAVGVRGLRMLGAQ-VGYIVPNRFEYGYGLSPEIVALAAREQPDVLVTVDNGIA 140

Query: 141 SVAGVAAAQARGIKVIVTDHHLPGEQLPACDALVNPNVGPEKCGQGSPLFDSRVQDARMK 200
            VAGVAAA A GI V+VTDHH+PG QLP    +VNPN    + G G P           K
Sbjct: 141 DVAGVAAANALGIDVVVTDHHMPGAQLPEARVIVNPN----QPGCGFP----------SK 186

Query: 201 NLAGVGVMFYLLLALRAKLHGQGAFGAA-KPDLSPLLDLVALGTVADLVPLDFNNRVLVE 259
           +LAGVGVMFY+LLALRA+L  +GAF    +P L  LLDLVALGTVAD+V LD NNR+LV 
Sbjct: 187 HLAGVGVMFYVLLALRAELRNRGAFTPQNQPRLDALLDLVALGTVADVVRLDANNRLLVA 246

Query: 260 AGLQRMRSGRACAGIAALVEVGKRSLATLCSTDLAFTVGPRLNAAGRLEDMRLGVACLLT 319
            GL+RMR+GR CAGIAAL  V  R      + DL F +GPRLNAAGRL DM LG+ CLLT
Sbjct: 247 QGLKRMRAGRMCAGIAALFRVSGREARRASTFDLGFGLGPRLNAAGRLADMSLGIECLLT 306

Query: 320 DDAAQARRHAEQLDAINRERRDLQASMVAEA-ELMAASLGHTDAVG---VALFEPSWHAG 375
           DD  +A   A +LD +NRERR+++A M  EA  +++++L   D  G   +A++  +WH G
Sbjct: 307 DDFDRAMAIAAELDGMNRERREIEAGMQQEAMAILSSTLASMDDAGRHTIAVYNETWHQG 366

Query: 376 VVGLVASKLKERLHRPVIAFAPAGIEECGEGSPPFDSGAQEVRTGNTQLRGSARSIPGFH 435
           V+G+VAS+LK++ HRPVI FAP             D G          ++GS RSIPGFH
Sbjct: 367 VIGIVASRLKDKFHRPVITFAPG------------DDGV---------IKGSGRSIPGFH 405

Query: 436 IRDALAAIDARQPGLIERFGGHAMAAGLSLKADDYPRFAAAFDAIARELIEPERLQAVLY 495
           +RDAL A   R PGLI +FGGHAMAAGLSL+AD + RF   F+A+ RE +    L  VL 
Sbjct: 406 LRDALDAAHKRCPGLIVKFGGHAMAAGLSLRADGFDRFVETFEAVGREWLNEALLSRVLE 465

Query: 496 TDGELPPGAATLALARQLREAGPWGQAFPEPLFDNLFDCAGWKLMGERHLRLQLRDPRDG 555
           TDGE  P   T     +L E   WGQ FP P F   FD     ++ ++HL+LQL   R  
Sbjct: 466 TDGEAEPECFTPQFV-ELLETHVWGQGFPAPSFCGEFDVLSQAVLKDKHLKLQL--GRGK 522

Query: 556 AVHDAVMFNAYHGQPPPPRLRAAYELTINDWQGRESPRLLLRHIE 600
              +A+ FN  H +P       AY L  N + G    ++++ H +
Sbjct: 523 QRFEAIWFN--HAEPLGASAYVAYRLDNNTFNGITRVQMVIEHAQ 565