Pairwise Alignments

Query, 602 a.a., DHHA1 domain-containing protein from Rhodanobacter sp000427505 FW510-R12

Subject, 580 a.a., single-stranded-DNA-specific exonuclease RecJ from Phaeobacter inhibens DSM 17395

 Score =  251 bits (642), Expect = 5e-71
 Identities = 207/590 (35%), Positives = 280/590 (47%), Gaps = 77/590 (13%)

Query: 28  RIYAARGVLEPGQAEHRLARMLSPQL---------LGGMAQAVELLVEAIRDDWAILIAG 78
           ++ A RGV       H  +  L+PQL         +  M  A    ++A+     I +  
Sbjct: 41  QVLARRGV-----PSHEASGFLTPQLKELLPDPRRMKDMEPAAARFLQAVERCERIAVFA 95

Query: 79  DYDCDGATGTAVAVRGLRLLGARRVDYAIPNRFAHGYGLSPAFVASLQPTPQLIVTVDNG 138
           DYD DG +  A+ +  L  +G     Y +P+R   GYG + A +A+L     LIV VD G
Sbjct: 96  DYDVDGGSSAALLLVWLNQVGLSATLY-VPDRIDEGYGPNDAAMAALAREHDLIVCVDCG 154

Query: 139 VASVAGVAAAQARGIKVIVTDHHLPGEQLPACDALVNPNVGPEKCGQGSPLFDSRVQDAR 198
             S   +AAA  +G  VIV DHHL GE LP C A+VNPN   E              D  
Sbjct: 155 TLSHGPIAAA--KGADVIVLDHHLGGETLPDCVAVVNPNRQDE--------------DGD 198

Query: 199 MKNLAGVGVMFYLLLALRAKLHGQGAFGAAKPDLSPLLDLVALGTVADLVPLDFNNRVLV 258
           +      GV+F +L+ LR ++  +G      PDL  LLDLVAL TVAD+ PL   NR LV
Sbjct: 199 LGYFCAAGVVFLMLVELRRQMRDKGL--GTGPDLMALLDLVALATVADVAPLIEANRALV 256

Query: 259 EAGLQRMRSGRACAGIAALVEVGKRSLATLCSTDLAFTVGPRLNAAGRLEDMRLGVACLL 318
             GL+ M + R   G+ AL +V +   A   +  L F +GPR+NA GR+    LG   L 
Sbjct: 257 RQGLKVMAT-RQRPGLVALADVSRMDSAP-STYHLGFLLGPRVNAGGRIGKADLGARLLA 314

Query: 319 TDDAAQARRHAEQLDAINRERRDLQASMVAEAELMAASLGHTDAVGVALFEPSWHAGVVG 378
           T D A+A   A +LD +N ERRD++ ++ A A   A + G  DA  V      WH GVVG
Sbjct: 315 TSDPAEAEAIAARLDELNTERRDIENAVRAAALEQAEARG-LDAPLVWAAGEGWHPGVVG 373

Query: 379 LVASKLKERLHRPVIAFAPAGIEECGEGSPPFDSGAQEVRTGNTQLRGSARSIPGFHIRD 438
           +VAS+LKE   RP I     G           D G           +GS RS+ G  +  
Sbjct: 374 IVASRLKEAAGRPAIVIGLDG-----------DEG-----------KGSGRSVSGIDLGA 411

Query: 439 ALAAIDARQPGLIERFGGHAMAAGLSLKADDYPRFAAAFDAIARELIEPERLQAVLYTDG 498
           ++    A   GL+ + GGH MAAGL++  D      A    +  +    +   + L  DG
Sbjct: 412 SIQR--AAAEGLLIKGGGHKMAAGLTVARDQLEPAMARLSELLAKQGAGDLGPSDLKLDG 469

Query: 499 ELPPGAATLALARQLREAGPWGQAFPEPL--FDNLFDCAGWKLMGERHLRLQLRDPRDGA 556
            L PGAAT+ L  Q+ +AGP+G   P P   F +L      K +GE HL+L L D     
Sbjct: 470 MLMPGAATVPLIEQIEQAGPFGAGAPAPRYGFPDL-QVRFAKRVGESHLKLSLSDGLSSG 528

Query: 557 VHDAVMFNAY----------HGQPPPPRLRAAYELTINDWQGRESPRLLL 596
           + DA+ F A+          HG     R   A  L IN W GR+S +L L
Sbjct: 529 I-DAICFGAFDTALGSRLLDHG---GARFHFAGRLEINTWGGRQSVQLRL 574