Pairwise Alignments

Query, 602 a.a., DHHA1 domain-containing protein from Rhodanobacter sp000427505 FW510-R12

Subject, 585 a.a., single-stranded-DNA-specific exonuclease RecJ (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  233 bits (595), Expect = 1e-65
 Identities = 208/595 (34%), Positives = 275/595 (46%), Gaps = 70/595 (11%)

Query: 17  GWPDSVHPVLQRIYAARGVLEPGQAEHRLARML-----SPQLLGGMAQAVELLVEAIRDD 71
           G PD+V   L R    RGV  P +AE  LA  L      P+ L  M +A   +  AI  +
Sbjct: 38  GLPDAVCRTLAR----RGVA-PEEAEDFLAPTLRALLPDPRSLRDMERAAARVNAAIARN 92

Query: 72  WAILIAGDYDCDGATGTAVAVRGLRLLGARRVDYAIPNRFAHGYGLSPAFVASLQPTPQL 131
             I I  DYD DG +  A+ +  LR  G     Y +P+R   GYG +   + +L     L
Sbjct: 93  ERIAIFADYDVDGGSSAALLIDWLRAQGRTATLY-VPDRIDEGYGPNIPAMEALADAHDL 151

Query: 132 IVTVDNGVASVAGVAAAQARGIKVIVTDHHLPGEQLPACDALVNPNVGPEKCGQGSPLFD 191
           I+ VD G  S   VAAAQ  G  V++ DHHL  E LPA  A+VNPN   E          
Sbjct: 152 IICVDCGTLSHDPVAAAQ--GTDVVILDHHLAEECLPAAHAVVNPNRQDE---------- 199

Query: 192 SRVQDARMKNLAGVGVMFYLLLALRAKLHGQGAFGAAKPDLSPLLDLVALGTVADLVPLD 251
               D  + +L    V+F LL+    +   Q A G    DL  LLDLVAL TVAD+ PL 
Sbjct: 200 ----DGSLSHLCAAAVVFLLLVEANRQ---QRAAGQPGQDLMALLDLVALATVADVAPLS 252

Query: 252 FNNRVLVEAGLQRMRSGRACAGIAALVEVGKRSLATLCSTDLAFTVGPRLNAAGRLEDMR 311
             NR  V  GL  M   R   G+ AL +      A   S  L F +GPR+NA GR+    
Sbjct: 253 GVNRAFVRQGLTVM-GRRERPGLTALSDSAGLDRAP-SSYHLGFVLGPRINAGGRIGAAD 310

Query: 312 LGVACLLTDDAAQARRHAEQLDAINRERRDLQASMVAEAELMAASLGHTDAVGVALFEPS 371
           LG   L T D  +A   AE+L+ +N ERRD++A + A A   A + G    +  A  E  
Sbjct: 311 LGARLLATRDPHEAAALAERLEKLNAERRDIEAQVRASALEQAETRGLNAPLAWAAGE-G 369

Query: 372 WHAGVVGLVASKLKERLHRPVIAFAPAGIEECGEGSPPFDSGAQEVRTGNTQLRGSARSI 431
           WH GVVG+VAS+LKE  +RP I     G           D G           +GS RS+
Sbjct: 370 WHPGVVGIVASRLKETANRPAIVIGLEG-----------DEG-----------KGSGRSV 407

Query: 432 PGFHIRDALAAIDARQPGLIERFGGHAMAAGLSLKADDY-PRFAAAFDAIARELIEPERL 490
           PG  +  A+  +     GL+ + GGH MAAGL+++ D   P  A   + +A +    +RL
Sbjct: 408 PGIDLGAAIQRL--AHEGLLLKGGGHKMAAGLTVRRDLLEPAMARLSELLAAQ--GADRL 463

Query: 491 -QAVLYTDGELPPGAATLALARQLREAGPWGQAFPEPLFDNLFDCAGW-KLMGERHLRLQ 548
               L+ DG L P A T  L  ++ +AGP+G + P P F        + K +GE HLR  
Sbjct: 464 GPKGLHVDGVLSPRAITTELITRIEDAGPFGASAPAPRFALPSVTIRYAKPVGESHLRFS 523

Query: 549 LRDPRDGAVHDAVMFNAYH-------GQPPPPRLRAAYELTINDWQGRESPRLLL 596
              P  G   D + F A+         Q        A  L IN W G+   +L L
Sbjct: 524 FAGP-CGTRMDGIAFGAFDTPIGPALSQSARGTFHLAGRLEINSWGGQHKAQLRL 577