Pairwise Alignments

Query, 602 a.a., DHHA1 domain-containing protein from Rhodanobacter sp000427505 FW510-R12

Subject, 572 a.a., single-stranded-DNA-specific exonuclease recJ (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  231 bits (589), Expect = 6e-65
 Identities = 168/552 (30%), Positives = 274/552 (49%), Gaps = 58/552 (10%)

Query: 22  VHPVLQRIYAARGVLEPGQAEH----RLARMLSPQLLGGMAQAVELLVEAIRDDWAILIA 77
           + P+L ++   RG+ + G A+     +L  +  P L+  M  AVE L +A+     ILI 
Sbjct: 27  ISPILGQLLVQRGITKAGDAKKFFRPQLPDLHDPFLMKDMDIAVERLNKAMGKKERILIY 86

Query: 78  GDYDCDGATGTAVAVRGLRLLGARRVDYAIPNRFAHGYGLSPAFVASLQPTPQ-LIVTVD 136
           GDYD DG T  A+  + ++   +  +DY IP+R+  GYG+S   V     T   LI+ +D
Sbjct: 87  GDYDVDGTTAVALVYKFIQQFYSN-IDYYIPDRYNEGYGISKKGVDYASETGVGLIIVLD 145

Query: 137 NGVASVAGVAAAQARGIKVIVTDHHLPGEQLPACDALVNPNVGPEKCGQGSPLFDSRVQD 196
            G+ +V  +  A+ +GI  I+ DHH+P + LP   A++N     ++     P        
Sbjct: 146 CGIKAVEEITYAKEKGIDFIICDHHVPDDILPPAVAILNA----KRLDNTYPY------- 194

Query: 197 ARMKNLAGVGVMFYLLLALRAKLHGQGAFGAAKPDLSPLLDLVALGTVADLVPLDFNNRV 256
               +L+G GV F  + A           G     L PLLDLVA+   +D+VP+   NR+
Sbjct: 195 ---THLSGCGVGFKFMQAFAINN------GIEFHHLIPLLDLVAVSIASDIVPIMGENRI 245

Query: 257 LVEAGLQRMRSGRACAGIAALVEVGKRSLATLCSTDLAFTVGPRLNAAGRLEDMRLGVAC 316
           L   GL+++ S  +  G+ A+++V   S   +  +D+ F +GPR+NA+GR+++ +  V  
Sbjct: 246 LAYHGLKQLNSNPS-VGMKAIIDVCGLSEKEITVSDIVFKIGPRINASGRIQNGKEAVDL 304

Query: 317 LLTDDAAQARRHAEQLDAINRERRDLQASMVAEAELMAASL-GHTDAVGVALFEPSWHAG 375
           L   D + A   A Q++  N  R+DL  SM  EA  + A+L G ++   + L+   WH G
Sbjct: 305 LTEKDFSAALEKAGQINQYNETRKDLDKSMTEEANNIVANLEGLSERRSIVLYNEEWHKG 364

Query: 376 VVGLVASKLKERLHRPVIAFAPAGIEECGEGSPPFDSGAQEVRTGNTQLRGSARSIPGFH 435
           V+G+VAS+L E  +RP +                        RT +    GSARS+ GF 
Sbjct: 365 VIGIVASRLTEVYYRPAVVL---------------------TRT-DDMATGSARSVSGFD 402

Query: 436 IRDALAAIDARQPGLIERFGGHAMAAGLSLKADDYPRFAAAFDAIARELIEPERLQAVLY 495
           +  A+         L+E FGGH  AAGLS+K ++   F   F+    + I PE+  AV+ 
Sbjct: 403 VYKAI----EHCRDLLENFGGHTYAAGLSMKVENVEAFTRRFEEYVSQHILPEQTSAVIN 458

Query: 496 TDGELPPGAATLALARQLREAGPWGQAFPEPLF--DNLFDCAGWKLMG--ERHLRLQLRD 551
            D E+     T      L++  P+G    +P+F   +++D    K++G  + H++L+L D
Sbjct: 459 IDAEIDFRDITSKFFNDLKKFNPFGPDNIKPIFCTHHVYDYGTSKVVGRDQEHIKLELVD 518

Query: 552 PRDGAVHDAVMF 563
            +   V + + F
Sbjct: 519 NKSNNVMNGIAF 530