Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Rhodanobacter sp000427505 FW510-R12

Subject, 854 a.a., AAA ATPase, central region:Clp, N terminal:Clp, N terminal from Pseudomonas syringae pv. syringae B728a

 Score =  291 bits (745), Expect = 1e-82
 Identities = 178/396 (44%), Positives = 238/396 (60%), Gaps = 23/396 (5%)

Query: 22  HEFMTVEHLLLALTENQ--SALGALRACGADLPRLSADLERIINETVPVL-PPGDERDTQ 78
           H  +   HL+ AL E Q  S    L   G D+  L  +L   ++    +  P GD   +Q
Sbjct: 26  HPAIEPAHLMQALLEQQGGSIKPLLLQVGFDINSLRKELSAELDRLPKIQNPTGDVNMSQ 85

Query: 79  PTLGFQRVLQRAVYHVQSSGRKEVTGANVLVAIFGEKDSHAVYFMHQQEITRLDVVNYIS 138
                 R+L +A    Q  G + ++   VL+A   E        + Q             
Sbjct: 86  D---LARLLNQADRLAQQKGDQFISSELVLLAAMDENSKLGKLLLGQ------------- 129

Query: 139 HGIAKIGDEPAAGVSGGERE-GEEGGEPKGNPLHEFASNLNELALEGKIDPLIGRADEIE 197
            G++K   E A     GE    +   E     L ++  +L + A EGK+DP+IGR DEI 
Sbjct: 130 -GVSKKALENAINNLRGEGAVNDPNVEESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIR 188

Query: 198 RTIQVLCRRRKNNPLYVGEAGVGKTALAEGLAKRIVDGEVPEVLESATIWSLDLGALVAG 257
           RTIQVL RR KNNP+ +GE GVGKTA+AEGLA+RI++GEVP+ L    + SLD+GAL+AG
Sbjct: 189 RTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAG 248

Query: 258 TKYRGDFEKRLKGVIAQLKKQPGAI-LFIDEIHTIIGAGSASGGTMDASNLIKPMLASGE 316
            KYRG+FE+RLK ++ +L KQ G I LFIDE+HT++GAG   G +MDA N++KP LA GE
Sbjct: 249 AKYRGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAGKGEG-SMDAGNMLKPALARGE 307

Query: 317 LRCIGSTTFQEYRGVFEKDRALARRFQKIDVVEPTVADSIEILKGLRSRFEEHHHVAYTN 376
           L C+G+TT  EYR   EKD AL RRFQK+ V EP+  D+I IL+GL+ R+E HH VA T+
Sbjct: 308 LHCVGATTLNEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITD 367

Query: 377 EALKAAVDLSVKHIPDRLLPDKAIDVIDEAGARQRL 412
            A+ AA  LS ++I DR LPDKAID+IDEA +R R+
Sbjct: 368 GAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRM 403



 Score =  262 bits (669), Expect = 6e-74
 Identities = 162/430 (37%), Positives = 249/430 (57%), Gaps = 31/430 (7%)

Query: 333 EKDRALARRFQK----IDVVEPTVADSIEILKGLRSRF----EEHHHVAYTNEALKAA-- 382
           EKD A  +R +K    I+ +E   AD  EI    ++      +    +  + + L+AA  
Sbjct: 432 EKDEAAIKRLEKLQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARR 491

Query: 383 -------VDLSVKHIPDRLLPDKAIDVIDEAGARQRLLPEDQRT-GKVDVGEVEYIVAKM 434
                   +L    IPD    ++++ ++D+ G      PE+Q    KV   E+  +V+K 
Sbjct: 492 RGDLNRMAELQYGIIPDL---ERSLQMVDQHGK-----PENQLLRSKVTEEEIAEVVSKW 543

Query: 435 ARIPAKQVSASDRDVLRNLERNLKMVVFGQDPAIEALAASIKMARSGLADPSKPIGCFLL 494
             IP  ++   +RD L  +E  L   V GQ+ A+ A++ +++ +R+GL+DP++P G F+ 
Sbjct: 544 TGIPVSKMLEGERDKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMF 603

Query: 495 AGPTGVGKTEVTKQLAMQL---GIEMIRFDMSEYMEAHSVSRLVGAPPGYVGFDQGGLLT 551
            GPTGVGKTE+ K LA  L      M+R DMSE+ME HSV+RL+GAPPGYVG+++GG LT
Sbjct: 604 LGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLT 663

Query: 552 EAVTKHPHAVLLLDEIEKAHPDVFNILLQVMDRGVLTDTNGREANFKNVVVVMTTNAGAA 611
           EAV + P++++LLDE+EKAH DVFNILLQV++ G LTD++GR  +F+N V+VMT+N G+A
Sbjct: 664 EAVRRKPYSLILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSA 723

Query: 612 IAARRSMGFVEQKHESDAMEVIRRIFTPEFRNRLDAIIQFGALDFEHILRVVDKFLIELE 671
              +  +G  E +  +  M+ +   F PEF NR+D ++ F  L  + I  + D  L  L 
Sbjct: 724 -QIQELVGDREAQRAA-VMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLR 781

Query: 672 SQLTEKRVSLDVGADARRWLAEHGFDPQMGARPMARVIQEKVKRALADELLFGKLAEGGV 731
            +L E+ +S+ +  +A   L   G+DP  GARP+ R IQ  ++  LA  +L G    G  
Sbjct: 782 KRLAERELSMTLSPEALDKLIAVGYDPVYGARPLKRAIQRWIENPLAQMILSGSFMPGTT 841

Query: 732 VRLSVADGEL 741
           +   V D E+
Sbjct: 842 ITGKVVDDEI 851