Pairwise Alignments

Query, 248 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Rhodanobacter sp000427505 FW510-R12

Subject, 249 a.a., RNA methyltransferase, TrmH family, group 3 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  106 bits (264), Expect = 5e-28
 Identities = 76/234 (32%), Positives = 112/234 (47%), Gaps = 9/234 (3%)

Query: 8   GINPVEGALSNDAERVREVLVENGQRNARVLELAERAQKLKIPVQHRPRDELDRLAGEAR 67
           G+ PV   L++D  R+  V +  G+R      L +  +++++         LD+L     
Sbjct: 10  GLKPVLELLASDPARIDTVFIRRGRRTPDTDRLMDLCREMRVRFSLVEGQVLDKLYAGG- 68

Query: 68  HQGVAARYEAAPAAHESDLPGLLERDGSDA---LVLVLDGVTDPHNLGACLRSAAAAKVT 124
           HQGV AR   A      DL     +D  DA   L++ LD V DP N G   RS  A    
Sbjct: 69  HQGVVARLFEAGYVELDDLL----QDAPDAPLPLIIALDQVQDPGNAGTLARSLYALGGA 124

Query: 125 AVIVPKDRAVGLTPVVRRASAGGADRVPLIAVTNLARTLRELKDAGVWITG-LAGDTDTT 183
            +IVP+  A  L     RA+AG  +++P+  V NLAR L E  +AG  I G + G+    
Sbjct: 125 GLIVPRHNAAYLGAGAHRAAAGALEKLPVARVANLARALDEAAEAGYAIYGAMCGEGSVN 184

Query: 184 VYGVDFQGPVALVLGSEGEGLRRLTRELCDFVAKIPMPGTMESLNVSVATGVAL 237
            +    + P  LVLG+E +G+R    + CD +  IPM    +S NV+ A  + L
Sbjct: 185 AFTATLRTPCVLVLGNEDKGIRPNVAKRCDTLLHIPMLRDFDSFNVAQAGALLL 238