Pairwise Alignments

Query, 603 a.a., N-6 DNA methylase from Rhodanobacter sp000427505 FW510-R12

Subject, 793 a.a., SAM-dependent DNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

 Score =  126 bits (316), Expect = 4e-33
 Identities = 126/473 (26%), Positives = 199/473 (42%), Gaps = 62/473 (13%)

Query: 116 KFKDYLLPLLFIKRLSDVFDDEVQRLAETYGDRVTALAVLDADPTLVRFYLPPETRWPVI 175
           K++D +LP++ ++RL  + +   + + E    +   +  ++ D   +             
Sbjct: 29  KYRDVILPMVVLRRLDTLLEPSKEAVLEEVRFQKEEMNEIELDDAPL-----------CA 77

Query: 176 SGRETFAWPPKRTPKTLGEQLTTTVRALVKANPD-LAGVIDTVD-----FNESRNGEREI 229
           +    F    K T +TL    T   + L+    D L G  + V      FN         
Sbjct: 78  TSGYVFYNTSKWTLQTLFSTATNNQQILLANFEDYLNGFSENVKEIVECFNLKAQIRHMA 137

Query: 230 SDKALKGVVETFSDPRYRLG---LHDVEPDFL--------GRCYEYLLRKFAEGQGQSAG 278
               L  VVE F  P   L      D E + L        G  +E L+RKF E   + AG
Sbjct: 138 GKDVLLDVVEKFVSPYINLTPAVKEDPEGNKLPALSNLGMGYVFEELIRKFNEENNEEAG 197

Query: 279 EFFTPREVGFLMAEILRPRPGEQ------AYDYACGSFGLLIKLQLVCRRLDPLSKIPLK 332
           E FTPREV  LM  ++     +        YD ACGS G+L + Q       P S   + 
Sbjct: 198 EHFTPREVIELMTHLVFDPIKDNLPLSITVYDPACGSGGMLTETQNFVEEKYPASNRDIY 257

Query: 333 LYGQELTGSSYAIACMNRIIHDMQGEVLRGDSMRNPKYRDGNALKRFDLIIANPMWNQSF 392
           LYG+E+   +YAI   + +I     E +R  S  +      N   RFD +++NP + +S+
Sbjct: 258 LYGKEINDETYAICKSDMMIKGNNPENIRVGSTLSTDEFSSN---RFDFMLSNPPYGKSW 314

Query: 393 ---DPAIYENDPF--GRF------------EETGGVTTGKADWAWLQHTIASLGDNGRAA 435
                 I E      GRF            E+     +      +L   +  +     + 
Sbjct: 315 ASEQKHIKEGKEVVDGRFKVKLKDYWGVESEQEAIPRSSDGQLLFLMEMVTKMKSPQDSP 374

Query: 436 VVLDTGAVTRGSGSKNEDK---ERNIRRWFVEHDLIDGVILLPDNLFYNTTAAGIIVVLR 492
           +     +V  GS     D    E NIRR+ +E+D++D ++ LP+NLFYNT     I +L 
Sbjct: 375 LGSRIASVHNGSSLFTGDAGSGESNIRRFIIENDMLDAIVQLPNNLFYNTGITTYIWLLN 434

Query: 493 RNKPKGRKGKIMLVNASREFRK-----GNPKNHLTDDAIGRIASAWLKGEAVD 540
            NKP+ R+GK+ L++AS  FRK     GN     + + I  I S +L+ ++V+
Sbjct: 435 NNKPENRQGKVQLIDASLLFRKLRKNLGNKNCEFSPEHIAEIVSTYLENQSVE 487