Pairwise Alignments

Query, 461 a.a., HAMP domain-containing histidine kinase from Rhodanobacter sp000427505 FW510-R12

Subject, 420 a.a., sensor protein RstB, putative (RefSeq) from Shewanella amazonensis SB2B

 Score =  110 bits (274), Expect = 1e-28
 Identities = 84/283 (29%), Positives = 141/283 (49%), Gaps = 10/283 (3%)

Query: 165 LIAFALAAGGALLVRLQLQRQLKAIHRTTAEVAAGRLDRRITVGRSRDEFAMVARDVNRM 224
           L  + L AG ALL    L R ++ +   T      + D RI + + R +   +A   N M
Sbjct: 132 LFFYGLLAGVALLWVWPLSRDIRILREATEAFGRAKWDTRIALTK-RSQVKSLADTFNEM 190

Query: 225 LDQIEQLMNSARDVSNAIAHDLRTPLGRIR---AVLEDALHPQQPPQALREAATSAIDEI 281
              I  L+ + + ++NA++H++RTPL R++   A+L          + L +       +I
Sbjct: 191 ARHISALIENQQHLTNAVSHEIRTPLARLKFALALLPGYCGKDNDDEKLNQFLADMQLDI 250

Query: 282 DAVTRLVDKLLQIAEAEAGVRRQNFEPVALRELVGDIVELYQPAAESEGMTLALTVEDEP 341
             + +L+ +LL  A  EA      FE   L  L   + +  Q  ++   + L L  E + 
Sbjct: 251 KEMEQLLSELLTYASLEAPREGLKFETSNLSALTRQVTQRLQSLSQVP-IELHLP-EKDV 308

Query: 342 QVEADRDLLAGMLANLLDNALKYAGHGAAVRVVVRAAAEDVRIEVADDGPGIPPGLLGRA 401
           QV AD  L+   L NL+ NA+++A     +R+ +  A  + R+ V DDG GIP    G+ 
Sbjct: 309 QVPADPSLIERALQNLITNAIRFA--HTRIRIELVRADNEWRLSVEDDGEGIPLVDQGKI 366

Query: 402 TEPFFRADASRY-QRGNGLGLSIAAAVVALHRGQLRLEDAAPG 443
            EPF+R  +S+   +G+GLGL+I   ++  H+G++ LE + PG
Sbjct: 367 FEPFYRVSSSQNGNKGHGLGLAIIKRIMQRHKGKVSLE-SEPG 408