Pairwise Alignments

Query, 494 a.a., transglycosylase SLT domain-containing protein from Rhodanobacter sp000427505 FW510-R12

Subject, 532 a.a., lytic transglycosylase from Vibrio cholerae E7946 ATCC 55056

 Score = 84.0 bits (206), Expect = 1e-20
 Identities = 79/308 (25%), Positives = 131/308 (42%), Gaps = 41/308 (13%)

Query: 189 YQMWPQYQKADLP-EALLFGIMAKESGGKVHAVSRSGASGPLQFMYATGMRFGLGSDSGF 247
           Y +  + ++  LP E +L  I+  ES     A S   A+G  QF+ +TG R+GL  +  +
Sbjct: 120 YLITEKVEQRGLPLELVLLPIV--ESSFDPFAYSHGSAAGLWQFISSTGKRYGLKQNFWY 177

Query: 248 DLRFDPAASARANAEYINEQLRVFNDNLELALGAYNGGEGRMRRTVGDDTSVSFYDPRVY 307
           D R D AA+  A  +Y+    + F+ +   A+ AYN GEGR+ R +  +           
Sbjct: 178 DGRRDVAAATDAALDYLTVLNQHFDGDWYHAIAAYNSGEGRVARAIKANKKAGKPIDFFS 237

Query: 308 DQLSQETRDYVPAVLAAAWLFQHPDSYNLRFPKVDGAPGTVTLKRPASLSELTVCLGSAG 367
             L +ET  YVP ++A A +  + + Y +  P ++  P   T+  P    +L +    AG
Sbjct: 238 LDLPKETSGYVPKLIALADVIANQEKYGISIPAIENRPVLATVD-PKEQLDLAIAARYAG 296

Query: 368 GMGDGWFRTLRNLNPRLDPQVTQPAGTPLQLPKLLEKAYASRCVDGPWPILAGDLHHAVV 427
                  + L++ NP  +   T P G                             H  ++
Sbjct: 297 LT----VKELQSFNPAYNQWATAPNGP----------------------------HQLLI 324

Query: 428 PVAAAPVEPAPPPAARGTS----RYKVRRGDTLISIVRKLHCSSVQEVAEANGLKHHYLS 483
           PV             RG      RYKV+ GDTL +I  K + ++ + + EAN +  + + 
Sbjct: 325 PVEKVERFNLAMEENRGKGIKVVRYKVKSGDTLSTIADKYN-TTAKVIKEANQIASNQIR 383

Query: 484 IGQTLKLP 491
           +G  L +P
Sbjct: 384 VGSYLFVP 391



 Score = 31.6 bits (70), Expect = 7e-05
 Identities = 20/48 (41%), Positives = 22/48 (45%)

Query: 445 TSRYKVRRGDTLISIVRKLHCSSVQEVAEANGLKHHYLSIGQTLKLPV 492
           T  YKVR GDTL  I  K    +   V   +     YL  GQ LKL V
Sbjct: 478 TVTYKVRSGDTLSGIANKFKVKTADIVKWNDLNSTQYLKAGQQLKLYV 525