Pairwise Alignments

Query, 1045 a.a., CusA/CzcA family heavy metal efflux RND transporter from Rhodanobacter sp000427505 FW510-R12

Subject, 1045 a.a., heavy metal efflux pump, CzcA family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1171 bits (3029), Expect = 0.0
 Identities = 576/1045 (55%), Positives = 791/1045 (75%), Gaps = 2/1045 (0%)

Query: 1    MIAALIRAAIANRVFVLLAALALAAAGVFSLTRTPLDALPDLSDTQVIIRTSWAGQSPQV 60
            M+  +I A+I  R  VL+ A+ +   GV  L +TPLDALPDLSD QVII+T + GQ+P++
Sbjct: 1    MLKYIIEASIRQRFMVLIIAIMITVWGVQELRKTPLDALPDLSDVQVIIKTPYPGQAPKL 60

Query: 61   VEDQITYPLATTMLSVPGAKTVRAYSFFGDSYVYVLFDDSTDLYWARSRVLEYLSQVRDQ 120
            VE+Q+TYPL+T ML+VPGAKTVR YS FGDSYVYV+F++ TD+YWARSRVLEYLSQ+  +
Sbjct: 61   VEEQVTYPLSTAMLAVPGAKTVRGYSMFGDSYVYVIFEEGTDIYWARSRVLEYLSQISSR 120

Query: 121  LPVGVNPSLGPDATGLGWVYEYALVDRTGKHDLGELRALQDWFLRYQLKTVPDIAEVASL 180
            LP  V PSLGPDA+G+GWV+EYALVDR+G  DL +L++LQDW+L+ +L++V  ++EVA++
Sbjct: 121  LPQNVQPSLGPDASGVGWVFEYALVDRSGNLDLSQLKSLQDWYLKLELQSVAGVSEVATV 180

Query: 181  GGMERAWQIVPDPRALTARGITVAQLTDAVRAANGAGGGSVVEQGEAELMVRSEGYLRSR 240
            GGME+ +QIV +P  +    + +A + DA+  +N   GGSV+E  EAE MVR++GY ++ 
Sbjct: 181  GGMEQTYQIVLEPDKMAIYKLDIASIKDAIEKSNSETGGSVIEMAEAEYMVRAKGYRQTL 240

Query: 241  EDFENVPIS-TNTNGVPVLLREVATVRRGPSFRRGIVELDGQGEVVGGVAVLRSGKNAKA 299
            EDF  +P+  T+ +G  + L++VATVR+GP+ RRGI ELDG+GEVVGG+ V+R G+NA A
Sbjct: 241  EDFREIPLGITSPSGTGLTLKDVATVRKGPASRRGIAELDGEGEVVGGIVVMRYGENALA 300

Query: 300  AIEAVKAKLTELKRSLPAGVEIVPTYDRSQLIDAAVENLWGKLLEEFLVVALVCVLFLGH 359
             I+AVKAKL ELK  LP GVEI+PTYDRS LI  +V+NL+ K++EE LVV LVC+LFL H
Sbjct: 301  TIDAVKAKLEELKAGLPDGVEIIPTYDRSHLILKSVDNLFSKVVEEMLVVGLVCLLFLLH 360

Query: 360  LRSALVAVVSLPLGVLAAFIALHLQGVSANLMSLGGIAIAIGAMVDAAVVMIENTHKHLE 419
             RS LVAV++LPL +L AFI ++  GV+AN+MSLGGIAIAIGA+VD A+VMIEN HKHLE
Sbjct: 361  ARSTLVAVITLPLSILIAFIVMNKMGVNANIMSLGGIAIAIGAVVDGAIVMIENLHKHLE 420

Query: 420  HWRDAHDGGEPQGAVRWSVVVEAAAEVGPALFISLLIIALSFIPVFALQGQEGKLFKPLA 479
            H++  H+  EP     W +V EA+ EVGPALF SL+II LSF+PVFAL+ QEG+LF PLA
Sbjct: 421  HFKADHNR-EPDTKEHWRIVTEASIEVGPALFFSLIIITLSFVPVFALEAQEGRLFAPLA 479

Query: 480  FTKTYAMAAAAGLAVTLVPVLMGYLIRGRIRPEHTNPLNRGLIALYRPILEAVLHHPKTT 539
            +TKT+AMAAAA L++TLVP+LMGY IRG+I  E +NP++R LIA+Y+P L+ VL  PK T
Sbjct: 480  YTKTFAMAAAAFLSITLVPILMGYFIRGKIPSERSNPISRFLIAIYQPSLKLVLKFPKVT 539

Query: 540  LALAGLLLLTALLPLSRLGSEFMPAMDEGTLLYMPTALPGLSAGKASQLLQLTDRMIKTV 599
            L LA + L +A  P++R+GSEFMP ++EG LLYMPTALPG+SA KA+++LQ TDR+IKTV
Sbjct: 540  LMLALIALASAWYPMTRMGSEFMPTLEEGDLLYMPTALPGISASKAAEVLQQTDRLIKTV 599

Query: 600  PEVDHVFGKAGRANTATDPAPLEMFETTITFKPKDQWRPGMTMAKIKAELNKAVQVPGLT 659
            PEV  VFGK GRA TATDPAPL M ETTI  KP D+WR GMT+  I A+L + V+VPGLT
Sbjct: 600  PEVARVFGKVGRAETATDPAPLTMLETTIMLKPHDEWREGMTLDGIIAQLQQTVKVPGLT 659

Query: 660  NLFVPPLRNRIDMLATGIKSPIGIKVLGPDPSTLQEVTDRIETVARQVPGVGSAIAERAA 719
            N +V P++ RIDML+TGIK+P+GIK+ G D + LQ +  +IE +  +VP   SA AER+ 
Sbjct: 660  NAWVQPIKTRIDMLSTGIKTPVGIKITGADVNELQSIGTKIEAILSKVPHTKSAYAERSG 719

Query: 720  SGRYVDVRIRRVDAARYGLTQQQVQQLVATVVGGDSIGQTVEGRERYPIVLRYPRAERDS 779
             GRY+D+  +   AARYG+T Q +Q +V   +GG  IG++V+G ERYPI LRYPR  RD+
Sbjct: 720  GGRYIDISPKLDVAARYGMTLQDIQDVVRYAIGGMDIGESVQGAERYPINLRYPRELRDN 779

Query: 780  LAALKVLPIVAANGAQLTLAQVADIKVVAGPPQLKSENGQLASYLYVDTAGRDLGTVVAD 839
            +  L+ LP++  +G  L L  +ADI++  G P LKSENG+L S++++D  G  +G  +A 
Sbjct: 780  IEKLRELPVITKSGHYLPLRNLADIEINDGAPMLKSENGRLISWVFIDIEGTSIGEYIAT 839

Query: 840  LQRAVARDVKLPPGITVAWSGQFEYLEQAMQRLTLVVPVVLLIVFVLIYAVFRRMSEAAL 899
             + A+  ++ +PP  + +++GQ+EY+++   +L  V+P+ L ++F+L+   F    +A++
Sbjct: 840  AKTALDAELVVPPRYSYSFAGQYEYMQRVDAKLKQVIPMALAVIFILLMMTFGSTIQASI 899

Query: 900  IMASVPLALVGGLWLIWLLGHAVSIATMIGFIALAGVAAEFGVVMMLYLRHAWDRQLAAD 959
            IM S+P ALVG  WL++LL + +S+A  +G IALAGVAAEFGVVM++YL +A   +   D
Sbjct: 900  IMLSLPFALVGSTWLLYLLDYNISVAVAVGMIALAGVAAEFGVVMLVYLNNAIKHRQEKD 959

Query: 960  PHSGPAELDEAIREGAVQRVRPKAMTVAVILAGLFPILLGHGAGSEVMQRIAAPMIGGML 1019
             +   ++L EA+ EGAV R+RPKAMTVA I  GL PI+ G G+G++VMQ+IAAPM+GGM+
Sbjct: 960  NYHSVSDLKEALMEGAVMRIRPKAMTVATIFFGLLPIMWGAGSGNDVMQKIAAPMVGGMV 1019

Query: 1020 TAPLLSMLVIPAAFRVLVLRRLRRN 1044
            TAPLLS+ ++PA + ++  R+L+++
Sbjct: 1020 TAPLLSLFLLPALYLLIYSRKLKKD 1044