Pairwise Alignments

Query, 304 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ from Rhodanobacter sp000427505 FW510-R12

Subject, 279 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ from Vibrio cholerae E7946 ATCC 55056

 Score =  221 bits (562), Expect = 2e-62
 Identities = 118/282 (41%), Positives = 173/282 (61%), Gaps = 5/282 (1%)

Query: 1   MNYRHAYHAGNFADVLKHVVLLALVEALQAKSTPFCYVDTHAGSGSYALEGHEAKKTGEY 60
           ++YRH++HAGN ADVLKH+V   ++ +LQ K  PF Y DTH+G G Y L    ++KTGEY
Sbjct: 2   LSYRHSFHAGNHADVLKHIVQSLILNSLQQKEKPFVYHDTHSGVGRYDLTHEWSEKTGEY 61

Query: 61  HDGIARLHPAEKLPPLLRRWRDGILGGEGNEHGLKYYPGSPLQVARA-LRPGDSAQLCEL 119
             GIAR+   + +P  L  + D I      E  L+YYPGSP +VARA LR  D   L EL
Sbjct: 62  KQGIARIWQQDNIPAELDSYLDAIRQLNQGE-TLRYYPGSP-RVARAHLREQDRMVLTEL 119

Query: 120 HAEEAAKLRELFRGNPQVHVHQRDGYEALKALLPPKEKRGLVLIDPPYEAQEAEYKLIEQ 179
           H  +   L + F  + QV +++ DG+  LKA LPP+E+RGLVLIDPPYE  + EY+ + +
Sbjct: 120 HPSDYPLLEQEFHRDRQVSIYKEDGFARLKASLPPQERRGLVLIDPPYELAK-EYRDVVR 178

Query: 180 ALKTALPRWPTGVYAVWYPIKLRSQVQPFLRKLQHSGVKRILRAELLVHPDDSPLRLNGS 239
           A+  +  RW TG+YA+WYP+  R  +   L  LQ   +++IL+ EL V PD +   +  S
Sbjct: 179 AIAQSYKRWATGIYAIWYPVVNRCDIDDMLEGLQGLEIRKILQIELGVAPDTNERGMTAS 238

Query: 240 GMVILNAPWKLDDTLREPLRMLASLLSQERPAEWKLDWLLDE 281
           GM+++N PW L+  ++  L  L   ++      +K++W++ E
Sbjct: 239 GMIVINPPWTLESQMQTILPFLKQAIA-PATGHYKVEWVVPE 279