Pairwise Alignments

Query, 1082 a.a., multidrug efflux RND transporter permease subunit from Rhodanobacter sp000427505 FW510-R12

Subject, 1050 a.a., Hydrophobe/amphiphile efflux-1 HAE1 (NCBI) from Rhodospirillum rubrum S1H

 Score =  999 bits (2583), Expect = 0.0
 Identities = 528/1064 (49%), Positives = 706/1064 (66%), Gaps = 37/1064 (3%)

Query: 1    MPSFFIDRPIFAWVVAILIALGGVLSILNLGVESYPSVAPPSVVVNAVYPGASADTTEKN 60
            M SFFIDRP+FAWV+AI+I L G LSIL L +E YP+VAPPSV +NA YPGASA T E  
Sbjct: 1    MASFFIDRPVFAWVIAIIIMLSGALSILFLPIEQYPTVAPPSVRINATYPGASAQTLENT 60

Query: 61   VTQVIEQQLTGIDHLLYFSSSSSSSGRASITLTFENGTNPDIAQVQVQNKVSLATPRLPS 120
            VTQVIEQQ+ G+D+L Y SS+S SSG A+ITLTF    NPDIAQVQVQNK+ LATP LP 
Sbjct: 61   VTQVIEQQMNGLDNLRYISSTSDSSGSATITLTFNPEANPDIAQVQVQNKLQLATPLLPQ 120

Query: 121  EVTKQGVVVAKANTGFLEVVALRSDNPAIDRARLNDIVASQVLDQIARVPGVGSTQQFGG 180
            EV +QG+ V KAN  FL VV   S + ++  + + D V+S + D ++R  GVG    FG 
Sbjct: 121  EVQQQGIQVTKANNTFLMVVGFISKDGSLTESGIADFVSSNIKDPLSRTNGVGEVTVFGS 180

Query: 181  EYAMRIWLDPDKLQGYGLSASQALAAVTAQNVQFAAGSLGSDPAANGQGISVTVATEGRF 240
            ++AMRIWLDPDKL  +GL+ ++  +A+TAQN + +AG +G  P+  GQ ++ T+  + R 
Sbjct: 181  QHAMRIWLDPDKLISFGLTTTEVKSAITAQNAEVSAGQIGGAPSVPGQELNATIVAQTRL 240

Query: 241  TTPEQFENIILRANNDGTTVKLGDVAWVSFGAGVYGFNTTYNGLPVAAFAIQLLPGANAL 300
             T E+F  I++R N DG+ ++L D+A +  GA  YG    YNG P +   + L  G NAL
Sbjct: 241  ETVEEFGAILIRVNADGSQIRLRDIARIEIGAESYGTMARYNGQPASGIGVSLATGGNAL 300

Query: 301  DVATAVHGKMDELAGSFPQGVSWFTPYDSTTFVKVSVNEVVHTLIEAIVLVFLVMLIFLQ 360
            D A AV   ++ L   FPQ V    PYD+T FVK+S+ EVV TL EAI+LVFLVM +FLQ
Sbjct: 301  DTADAVRATIERLRPIFPQSVDVIYPYDTTPFVKISIEEVVRTLGEAIILVFLVMYLFLQ 360

Query: 361  NIRATIIPTLVIPVALLGTFIGMLLLGFTINQLTLFGMVLAIGIVVDDAIVVIENVERIM 420
            NIRAT+IPT+ +PV LLGTF  M   GFTIN LT+FG+VLAIG++VDDAIVV+ENVER+M
Sbjct: 361  NIRATLIPTIAVPVVLLGTFGIMAAFGFTINTLTMFGLVLAIGLLVDDAIVVVENVERVM 420

Query: 421  TEDGLSPKEATKKAMGQITGAVVGITVVLIAVFVPSSFQPGAAGVIYKQFALTIAMSVAF 480
             ED LSP++AT+K+M QITGA+VGI +VL AVFVP +F  G+ G IY+QF+LT+A ++  
Sbjct: 421  HEDNLSPRDATRKSMRQITGALVGIALVLSAVFVPMAFFSGSVGAIYRQFSLTVASAMLL 480

Query: 481  SAFLALSFTPALCASFLTPVHEE---KKNFVFRWFNTAFGKITHTYTGHIGSAVRHAPRW 537
            S  +A+  TPALCA+FL P H +   KK F F WFN  F +    Y   +G  +    R+
Sbjct: 481  SVLVAVVLTPALCATFLKPSHGDPYAKKGF-FGWFNRGFDRTNSFYQSSVGHVIGRKWRY 539

Query: 538  VMVFVLISVLTGFLYTRLPGSFLPEEDQGFALAVVQLPPGASLQRTNAVMRQILTVLKQD 597
            ++++ LI V  G L+ RLP SFLP EDQG   A   LP GA+ +RT  V+ Q+    ++ 
Sbjct: 540  LLIYGLILVGLGLLFVRLPSSFLPNEDQGILFAQASLPAGATQERTQEVLDQMSRHFRES 599

Query: 598  PA--VDGVVQIAGFSFLGMGENVGMSFIRLKPWGERGWAPDQKAAQEQHDKLVKEGKAKP 655
             A  V+GV  + GFSF G G+N G++F+R+K W +R   PD+                  
Sbjct: 600  EADFVEGVFTVNGFSFSGRGQNSGLAFVRMKNWDDRD--PDKG----------------- 640

Query: 656  IDLGVTAAEFIQRANGAVQSVRDAQIFIVNVPTVQGLGQFGGFDMYLQDRGGTGRDALTA 715
                 +     +RA GA+  +++A+IF    P +  LG   GF+  L DR G G + L A
Sbjct: 641  -----SVFAVARRAMGALSRIKEARIFAFAPPAIIALGNASGFEFQLLDRAGQGHEKLMA 695

Query: 716  ARNTLLGAASQNPLLVGVRPNGLEDAPQLRLDVDRTQALSMGLSVGDIYNAISLMLAPVY 775
            ARN LLG A++NP L+ VRP+GLED PQL++D+D+ +A ++ LS+ DI + ++      Y
Sbjct: 696  ARNQLLGMAAKNPALMAVRPDGLEDNPQLKIDIDQEKASALQLSLSDINSTLTTTWGSSY 755

Query: 776  VNDFSYGGRVKRVIMQADSPHRMGPEAFQHIFTPSTRTNADGTPQMIPLSNVVQAKWQMA 835
            VNDF   GRVK+V + AD+P RM        +      N+ G  +M+P S      W   
Sbjct: 756  VNDFIENGRVKKVYLMADAPFRMQAADLDRWYV----RNSQG--EMVPFSAFTDVHWIYG 809

Query: 836  SPSLVRYNGYSAVEIVGSPAPGHASGEAMNIMQKIVSDDLPHGFGYDWTGQSYQEILSGN 895
            SP L RYNG S+ +I G PAPG ++G AM  M+ + +  LP GFGY+WTG SY+E LSG+
Sbjct: 810  SPRLERYNGQSSRKIAGQPAPGMSTGAAMAEMEAMAA-KLPPGFGYEWTGLSYEERLSGS 868

Query: 896  TAILLMVLSVVIVFLCLTALYESWSIPVSVLLVVPLGILGAVVFTLLRGLPDDIYFKIGV 955
             A  L  LS+++VFLCL ALYESW+IP +V+LVVPLGILGAV+ T  RGL +D++F+IG+
Sbjct: 869  QAPALYALSIIVVFLCLAALYESWAIPFAVILVVPLGILGAVIATSARGLSNDVFFQIGL 928

Query: 956  ITVMGLAAKNAILIVEFAVIEQRQGRTLREAVVDAARLRLRPILMTSIAFIGGVFPLFVS 1015
            +T MGLAAKNAILIVEFA      G  L EA V AAR RLRPI+MTS+AF  GV PL ++
Sbjct: 929  LTTMGLAAKNAILIVEFAKELYEGGMDLLEATVHAARQRLRPIIMTSMAFSLGVLPLAIA 988

Query: 1016 TGAGANARHAIGTGVIGGMLFATFLGVLLIPVFYVVVRRLLGDK 1059
             GAG+ +++AIGTGV+GGM+ AT L +  +P+F++++ R    K
Sbjct: 989  NGAGSGSQNAIGTGVLGGMISATVLAIFFVPLFFILILRAFTKK 1032