Pairwise Alignments

Query, 1082 a.a., multidrug efflux RND transporter permease subunit from Rhodanobacter sp000427505 FW510-R12

Subject, 1046 a.a., multidrug resistance protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  851 bits (2198), Expect = 0.0
 Identities = 444/1064 (41%), Positives = 669/1064 (62%), Gaps = 34/1064 (3%)

Query: 4    FFIDRPIFAWVVAILIALGGVLSILNLGVESYPSVAPPSVVVNAVYPGASADTTEKNVTQ 63
            FFI RPIFA VV+++I L G +++  L +  YP + PP V V A Y GAS +     V  
Sbjct: 5    FFIMRPIFATVVSLVIILAGFMAMRGLPIAQYPDIIPPQVEVEATYSGASPEVVAATVAA 64

Query: 64   VIEQQLTGIDHLLYFSSSSSSSGRASITLTFENGTNPDIAQVQVQNKVSLATPRLPSEVT 123
             +EQQ+ G+D++LY +S+SSS+G  ++ +TFE GT+PD A + V N+V  A P+LP +V 
Sbjct: 65   PLEQQINGVDNMLYINSTSSSTGTMNLMVTFEVGTDPDQATINVNNRVQAALPQLPEDVR 124

Query: 124  KQGVVVAKANTGFLEVVALRSDNPAIDRARLNDIVASQVLDQIARVPGVGSTQQFGGE-Y 182
            ++GV V K ++  L+V+++ S +   D   +++     V+D++ R+ GVG    F  + Y
Sbjct: 125  RRGVTVTKKSSNMLQVISMNSPDERYDTIYISNYALVNVIDELRRLKGVGDVVLFTAQDY 184

Query: 183  AMRIWLDPDKLQGYGLSASQALAAVTAQNVQFAAGSLGSDPAANGQGISVTVATEGRFTT 242
            +MR+WL PDK+    L+ S  + A+  QN QFAAG +G  P  +   ++  V T+GR +T
Sbjct: 185  SMRVWLQPDKMAQLRLTPSDVIGAIQEQNAQFAAGRIGQQPLHDPVELTFMVNTKGRLST 244

Query: 243  PEQFENIILRANNDGTTVKLGDVAWVSFGAGVYGFNTTYNGLPVAAFAIQLLPGANALDV 302
            PE+FENIILR   DG+T+KL  VA V  GA  Y F    NG P     I L PGANAL+ 
Sbjct: 245  PEEFENIILRVEEDGSTLKLKSVARVELGAKDYNFMGKENGKPTVPIGIFLAPGANALET 304

Query: 303  ATAVHGKMDELAGSFPQGVSWFTPYDSTTFVKVSVNEVVHTLIEAIVLVFLVMLIFLQNI 362
            A  V   M E++  FP GVS+  PYD+T FV+VS++EVV TL EA+VLVF+V+ +FLQN 
Sbjct: 305  ADRVSAAMAEMSLRFPDGVSYSIPYDTTKFVRVSIDEVVKTLFEAMVLVFIVIYLFLQNW 364

Query: 363  RATIIPTLVIPVALLGTFIGMLLLGFTINQLTLFGMVLAIGIVVDDAIVVIENVERIMTE 422
            RATIIP L +PV+++G F GM +LGFTIN LTLFG+VLAIG+VVDDAI+V+ENVERIM E
Sbjct: 365  RATIIPCLAVPVSVIGAFAGMYMLGFTINTLTLFGLVLAIGLVVDDAIIVLENVERIMAE 424

Query: 423  DGLSPKEATKKAMGQITGAVVGITVVLIAVFVPSSFQPGAAGVIYKQFALTIAMSVAFSA 482
            + L  K+AT KAM ++   +V   +VL AVF+P +F  G AG +YKQFA+TIA+S+A S 
Sbjct: 425  EHLPVKQATIKAMHEVASPIVATVLVLCAVFIPVAFAGGLAGQMYKQFAITIAVSMAISG 484

Query: 483  FLALSFTPALCASFLTPVHEEKKNFVFRWFNTAFGKITHTYTGHIGSAVRHAPRWVMVFV 542
             +AL+ +PALCA FL P H+E   F FRWFN  F  +T+ YT  +   ++     +++F 
Sbjct: 485  LVALTLSPALCAMFLKPGHQEPNRF-FRWFNNWFEGVTNRYTAGVTFLLKRMALGLVLFA 543

Query: 543  LISVLTGFLYTRLPGSFLPEEDQGFALAVVQLPPGASLQRTNAVMRQILTVLKQDPAVDG 602
             +  +T  L++ +PG  +P+EDQG+ +A+  LP G++L RT  V  ++      D +V  
Sbjct: 544  GLCGVTWHLFSIVPGGLVPDEDQGYVMAMAILPDGSALNRTEVVTDRLAKAASNDSSVQS 603

Query: 603  VVQIAGFSFLG--MGENVGMSFIRLKPWGERGWAPDQKAAQEQHDKLVKEGKAKPIDLGV 660
            V+   G+  +      N G S+I LKPW ER    + +++     ++ +EG       G 
Sbjct: 604  VMAFTGYDAVSGTNKPNTGFSWIMLKPWEER--KEESESSYSVVQRIFREG------AGY 655

Query: 661  TAAEFIQRANGAVQSVRDAQIFIVNVPTVQGLGQFGGFDMYLQDRGGTGRDALTAARNTL 720
            T                +  +   N P + G+   GGF++YLQ+RG      L A     
Sbjct: 656  T----------------EGVVIAFNPPPISGMSTTGGFEVYLQNRGTGDSKELAAMVQKF 699

Query: 721  LGAASQNPLLVGVRPNGLEDAPQLRLDVDRTQALSMGLSVGDIYNAISLMLAPVYVNDFS 780
            +GAA + P L GV      + PQL +++DR +A ++G+S+ +++  +       YVNDF+
Sbjct: 700  VGAAQKRPELAGVSSTFGANTPQLFVELDRNRAKALGVSINELFATMQSTFGTYYVNDFN 759

Query: 781  YGGRVKRVIMQADSPHRMGPEAFQHIFTPSTRTNADGTPQMIPLSNVVQAKWQMASPSLV 840
              GR   V++QAD+ +R  P+    ++  S + +      MIPL+++++ +    +  + 
Sbjct: 760  KFGRTFMVMVQADAQYRDNPDDLTKVYVRSNKGD------MIPLASLIKVERITGTEVVE 813

Query: 841  RYNGYSAVEIVGSPAPGHASGEAMNIMQKIVSDDLPHGFGYDWTGQSYQEILSGNTAILL 900
            R+N + A +IVG PAPG++SG+A+ +M+++ ++ LP  +   W G +YQE L+G T+ ++
Sbjct: 814  RFNVFPAAKIVGGPAPGYSSGQALAVMEELAAEVLPAEYSLGWIGSAYQERLTGGTSFMV 873

Query: 901  MVLSVVIVFLCLTALYESWSIPVSVLLVVPLGILGAVVFTLLRGLPDDIYFKIGVITVMG 960
              L +V+VFL L A YE WS+P++V+++VP  + GA+  T LRGL +D+Y ++ ++T++G
Sbjct: 874  FALGLVMVFLILAAQYEKWSLPLAVIMIVPFALFGAMAATWLRGLDNDVYLQVSLVTLIG 933

Query: 961  LAAKNAILIVEFAVIEQRQGRTLREAVVDAARLRLRPILMTSIAFIGGVFPLFVSTGAGA 1020
            LAAKNAILIVEFA+++  +G+ + E+V +AARLR RPI+MTS+AF+ G  PL +S+GAGA
Sbjct: 934  LAAKNAILIVEFAMMQVHEGKGIVESVTEAARLRFRPIIMTSMAFVLGCVPLAISSGAGA 993

Query: 1021 NARHAIGTGVIGGMLFATFLGVLLIPVFYVVVRRLLGDKLDGHE 1064
              RHAIGTG+IGGML ATF+    IP+F+ ++  L      GH+
Sbjct: 994  AGRHAIGTGIIGGMLAATFIATFFIPLFFRLIMELSARFTGGHQ 1037