Pairwise Alignments

Query, 614 a.a., DEAD/DEAH box helicase from Rhodanobacter sp000427505 FW510-R12

Subject, 663 a.a., DEAD/DEAH box family ATP-dependent RNA helicase from Vibrio cholerae E7946 ATCC 55056

 Score =  470 bits (1210), Expect = e-137
 Identities = 264/605 (43%), Positives = 365/605 (60%), Gaps = 25/605 (4%)

Query: 15  FGALALHPDVLRVLADVGYESPSPIQAATIPPLLEGRDVLGQAQTGTGKTAAFALPILSR 74
           F  LAL+  +L  L ++G+ SP+PIQAA IP LLEGRD LG+AQTGTGKTAAF+LP+L++
Sbjct: 28  FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87

Query: 75  IERKPGKPQALVLAPTRELAIQVAEAFQTYAAHLPGFQVLPIYGGQSYGPQLHSLKRGVH 134
           +     KPQA+V+APTRELAIQVA   +    ++ G +VL IYGG S   Q+ +LK G H
Sbjct: 88  LNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 147

Query: 135 VVVGTPGRVIDHLDKGTLDLSELKFLVLDEADEMLRMGFIDDVEKVLQATPPGRQVALFS 194
           +VVGTPGRV D + +  L L E    +LDEADEML+MGF+DDV  +++  P   Q  LFS
Sbjct: 148 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 207

Query: 195 ATMPAPIRKIAQRHLKEPVEVTIKAATTTAANIHQRYWFVSGMHKLDALTRILEAEPFDA 254
           ATMP  +++I +R L+ P  V +  +  T A + Q+YW V G+ K +A+ R+LE E  DA
Sbjct: 208 ATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKDEAMARLLETEETDA 267

Query: 255 MIIFARTKQATEELAEKLQARGLAAAAINGDIAQAQRERVIQQLKDGKLDILVATDVAAR 314
            I+F RT+Q TE LA+ L ARG  AAA++GDI Q+ RER +  +K G +DILVATDV AR
Sbjct: 268 SIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILVATDVVAR 327

Query: 315 GLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRSGEAILFVSPRERGMLHAIERATRQP 374
           GLDV RI+HV NYDIP+D ESY+HRIGRTGRAGR G+AIL V   +  ML  IER TR  
Sbjct: 328 GLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTIERVTRSS 387

Query: 375 IEQMQLPSVEVVNDVRIGKFKQRISDMLAQGDLGEFQKLIEQYEQEHNVPAVEIAAALAR 434
           +E++QLP  + V + R+ K  Q ++       L  F  L+E+ +    + A  +AA L +
Sbjct: 388 MEEIQLPHRDKVAESRLTKLGQELAADKEFSSLERFADLVEKLQASLEIDATTLAAILLK 447

Query: 435 IAQGDQPLLL--APP--PKREKYEPAAREHKPRERDSASRTTREHKPRSHEDALPRESGH 490
             QG +PL    A P     E+ +   RE +   RD      RE   R  E+        
Sbjct: 448 RQQGKRPLFYVGADPMIEAMEREKSRRRERRDDRRDGDRPARREFGGRDQEN-------- 499

Query: 491 PHPLRAHATEQGKRTYRIEVGHEHGVKPGNIIGAIANEAGLDSQYIGRLSIRDHYSLIDL 550
                 H  +    TY+++VG + GV+  +I+GA+ANE GL    IG + +   ++ + L
Sbjct: 500 ------HDWD----TYQLQVGRDQGVQVKDIVGALANELGLTKGSIGAIKLAQGHTFVQL 549

Query: 551 PDGMPKEIFEHLKKVWVVQQQLRIHEWDGSDTGNSAPPAHKPGGFRKPGSFKP---RPGG 607
           P  M  ++   L+K+ + Q+++     D  D   S   A + GG R+ G  +P   R GG
Sbjct: 550 PKAMSNDVSSKLRKLRIRQKEVGAVVCDFDDFRESRGGARREGGPRREGGRRPEGNREGG 609

Query: 608 AKPPR 612
            +  R
Sbjct: 610 FRGGR 614