Pairwise Alignments

Query, 462 a.a., TolC family protein from Rhodanobacter sp000427505 FW510-R12

Subject, 465 a.a., RND efflux system, outer membrane lipoprotein CmeC from Pseudomonas fluorescens FW300-N2E2

 Score =  108 bits (269), Expect = 5e-28
 Identities = 117/448 (26%), Positives = 199/448 (44%), Gaps = 42/448 (9%)

Query: 18  PVPAQWRHAVTADPAPPTDLHGWWHAFADPDLDALVDRALAHNLDVAQAVERLRAVRSLY 77
           PV  QW  A +      +    W + F D  L  L   AL++N D+  AV  +   ++ Y
Sbjct: 31  PVSEQWLPAASTPKGEVSADIEWQNFFTDSRLARLQSLALSNNRDLRLAVLNVEKAQAQY 90

Query: 78  KRAHARYLPEL-------HARTHDSIDPDASAS----YLVAGFDASWELGLFGRAEGTRR 126
           +   A  LP +       H+RT  S+    SA+    Y      +S+E+ LFGR +  + 
Sbjct: 91  RIQRAESLPSIDASVSGTHSRTPGSLSNTGSAATTHDYSAQLGLSSYEVDLFGRVQNLQD 150

Query: 127 ESQGALDAGVADLQAARVSLVAEVVREWIGLRTAQQQEQLLQQISQQRRQAWELQQTRQR 186
           E+     +     ++ ++SLVAEV   W+ L    ++  L Q+  + ++  +EL Q    
Sbjct: 151 EALEDYLSLTETRRSTQISLVAEVATAWLTLAADNERLHLAQETLRSQQATYELTQRSHA 210

Query: 187 LLLAAPGAVDQAQAA--WARAEAALAAPRQAADASAQRLAVLLGQNHPDP----AWLQAG 240
           L  ++  +V QAQ     AR +AA    +   D +A RL  L+G + P+     A+L++ 
Sbjct: 211 LGGSSGLSVAQAQTTVESARVDAAAYESQILQDRNALRL--LVGSDIPEELLPGAYLESA 268

Query: 241 -----TPPELGAWRLDGTPAELLRTRPEIARAEADVLRSAGDLALAHAELFPNIGLGASM 295
                 P EL        P+ LL+ RP++  AE  +  +  D+  A A  FP+I L A+ 
Sbjct: 269 AALVQVPAEL--------PSSLLQRRPDVLAAEHTLKSANIDIGAARAAFFPSISLTANA 320

Query: 296 VWATDINNNRRFSTTPNAINSLGPVIDIPLFDWGMRLAAKHARDHELKASVLAYRQAVLQ 355
             ++   +      + +   +  P I +P+FD G   A   +   E +  V  Y+Q +  
Sbjct: 321 GSSSSALSG--LFKSGSGAWTFAPSISLPIFDAGSNRATLDSAKTEREIQVQTYQQTLQS 378

Query: 356 GVAEVETALGGLEQ-QRRREQQETL---AWQALQRADQAVQVRNKLQLDSPLDRTESWIA 411
              EV  AL       RR E Q+ L   + ++ + +D   +  ++  L++ LD   S  +
Sbjct: 379 AFKEVADALAERSTLDRRIEAQQALTDASRKSFELSDALYRGGSQSYLEA-LDAQRSLYS 437

Query: 412 AEQAALELADARAAHSLAYVALFKALGG 439
           A+Q   +L   R       V L+K +GG
Sbjct: 438 AQQ---DLITLRLTEQSNRVTLYKVMGG 462