Pairwise Alignments

Query, 320 a.a., IS1595 family transposase from Rhodanobacter sp000427505 FW510-R12

Subject, 318 a.a., ISSod11, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  127 bits (318), Expect = 5e-34
 Identities = 83/274 (30%), Positives = 134/274 (48%), Gaps = 9/274 (3%)

Query: 17  FIQQYGTEAKCYRALYRARWPQGFRCPKCNSRPRSRFRRAGRIYYQCRACRHQTTLTSGT 76
           F+  +  E  C   LY  RWP GF CP C+S         G++  +C ACR Q ++TS T
Sbjct: 21  FVDWFHDEQSCTSYLYALRWPNGFICPSCSSHQSPYQLSNGKL--KCHACRFQCSVTSST 78

Query: 77  VFEGSKLPLTTWFLAMHLLTGSKTNMAALELKRHVGV-CYDTAWKLKHKIMQVMTEREEP 135
           +F+ ++ P+ +WF A+  +T  K  ++AL ++R +G+  Y TAW L HK+   M + E  
Sbjct: 79  LFDKTRTPMKSWFAAVWFITNQKNGVSALGVQRLLGLGSYQTAWSLMHKLRYAMVDPERD 138

Query: 136 RQLAGFVQIDDAYLGGERNGGKPGRGSENKQPFVIAVATDEALEHPTFAVI--EPVRSFD 193
           + L+G V++D+  +GG        +  + K+  ++ VA  E L    F  I    V S  
Sbjct: 139 K-LSGIVEVDETLIGGVIPKSSI-KNQQGKRKAIVLVAV-ELLSPSGFGRIRLRQVESAT 195

Query: 194 NVSLTDWGQRRLAPGAEVFSDGLGCFRRVVELDHAHTVLETAGGRAATEVKGARWVNVVL 253
              +  + Q  + PG+ + SDG   ++++ +  + H  +   G         A  V+ V 
Sbjct: 196 KEHIHQFIQDVIEPGSTICSDGSQAYKQIDKKGYKHNRMVHLGSSVPAHETMA-GVHRVS 254

Query: 254 GNVKRAISGCYHAMRQAKYARRYLAEAAYRFNRR 287
              KR + G Y    +AK    YL E  +RFNRR
Sbjct: 255 SLCKRWLLGTYQGAVKAKQLDYYLDEFTFRFNRR 288