Pairwise Alignments

Query, 423 a.a., type II secretion system F family protein from Rhodanobacter sp000427505 FW510-R12

Subject, 407 a.a., type II secretion system F family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  194 bits (492), Expect = 5e-54
 Identities = 113/403 (28%), Positives = 210/403 (52%), Gaps = 14/403 (3%)

Query: 25  LTTYEWVALDKRGKRMKGDMPAKNATLVKAELRRQGMNPQTVRERA--KPLFGSTGSTIK 82
           + T+ +   +  G +  G + A    L    L  +G+ P ++ + A  K  F      + 
Sbjct: 1   MATFYYQGRNADGSKASGLVEAATEELAAEMLLNKGIVPTSIAQGAAEKSAFDFNWKALL 60

Query: 83  PGDV-----AIFSRQIATMMASGVPMIQAFDIIADGQKNIRFKNVLIDVKQNIEGGSSLH 137
              V      IF RQ+ ++  +GVP++++   +A    N + K  L  V   +  G +L 
Sbjct: 61  TPSVPLEVLVIFCRQMFSLTKAGVPLLRSMRGLAQNCHNKQLKAALDSVCNELTNGRNLS 120

Query: 138 EALGRYPVQFDELYCNLVKAGEASGVLDTVLDTVATYKERTEAIKKKIKKALFYPMMVLA 197
            ++  +P  F  L+ ++++ GE +G LD  L  +A Y E+    +K+IK A+ YP  V+ 
Sbjct: 121 ASMQLHPAIFSPLFVSMIQVGENTGRLDQALLQLAGYYEQEVETRKRIKTAMRYPTFVIT 180

Query: 198 VVFIVVLIMLLFVVPVFAKTFQDAGAQLPAPTQLLVTASEFMQSYWFIVVGLIGG---GI 254
            V + + I+ + V+P F   F   G  LP PT++L+T S+F  +YW +++G+I G     
Sbjct: 181 FVLLAMFILNVKVIPQFTSMFSRFGVDLPLPTRILITTSDFFVNYWGLLLGIIVGLLFAF 240

Query: 255 AAIVIAKKRSVKFAHFLDRMSLKMPVMGSIVRNSAIARFARTLGVTFRAGVPLVEAMDAV 314
            A V      +++    D + L+MP++G IV  + ++RFART  +   AGVPL +++   
Sbjct: 241 RAWVNTTNGRIRW----DHLRLRMPIVGDIVNRAQLSRFARTFSLMLSAGVPLNQSLALS 296

Query: 315 AGATGSVVYGDAVKQMRDDISVGHQLQLAMKQTGLFPNMVVQMTAIGEESGALDNMLFKV 374
           A A  +      + +M+  I  G  +        +F  +V+QM ++GEE+G +D +L +V
Sbjct: 297 AEAIDNKFLEQRILEMKSQIESGVAVSATAINANIFTPLVIQMMSVGEETGRIDELLLEV 356

Query: 375 AEFYEEEVSNAVDTLSTLLEPIIMVVLGTLVGGMVVALYLPIF 417
           ++FY+ EV   + TL+  +EPI++V +  +V  + + ++LP++
Sbjct: 357 SDFYDREVDYDLKTLTARIEPILLVFVAAMVLVLALGIFLPMW 399