Pairwise Alignments

Query, 401 a.a., MFS transporter from Rhodanobacter sp000427505 FW510-R12

Subject, 455 a.a., transporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  308 bits (789), Expect = 2e-88
 Identities = 171/398 (42%), Positives = 248/398 (62%), Gaps = 5/398 (1%)

Query: 4   LSSLELRSALTLACVISLRLFGLFLIMPVFSLYAKAMPDATGFMIGLALGVYGIGQVLLQ 63
           LS  E + A +LA V  LR+ GLF+IMPVF+LY + +   +   +G+A+G YG+ Q +LQ
Sbjct: 6   LSGTEKKVAFSLASVFGLRMMGLFMIMPVFALYGQHLEGFSPLWVGIAIGAYGLTQAVLQ 65

Query: 64  IPLGLLSDRIGRKPAITIGLVLFAIGGLIAAMSHTLAGIALGRAVQGMGAVAGAGIALAA 123
           IP+G+LSD+ GRKP I  GLV+FAIG +IAA + T+ G+  GRAVQGMGA+A A +ALAA
Sbjct: 66  IPMGILSDKYGRKPVILAGLVVFAIGSVIAANAETIYGVVFGRAVQGMGAIAAAVLALAA 125

Query: 124 DLTAEENRSKAMGIIGVSIGLAFLLALILGPPLEAVAGLPGLFGATSILALVSLVLLWLI 183
           DLT +E R+K M IIG+ IGL+F L+L++GP +    GL GLF  T++LA++ ++L+  +
Sbjct: 126 DLTRDEQRTKVMAIIGMCIGLSFALSLLMGPIVAQHLGLTGLFWLTALLAILGMLLIQFL 185

Query: 184 VPTPVRARAPAAAGL---GQVLAMLRDGRMLVLNGSVFFLHALLTASFVGLPLLLAETLH 240
           VP P+  +AP    L    ++  M  + ++  LN  +F LH +LTA FV LPL L +   
Sbjct: 186 VPNPI-TQAPKGDTLATPAKLKRMFFEPQLFRLNAGIFILHLVLTAVFVALPLDLVDA-G 243

Query: 241 LPVNRHWELYLPVMTVAAFVMGATMHHMREVAQSLRIVTVCVVAIGLALLGFALSGRHLA 300
           L   +HW LY P    A F+M   +    +   +  +  + +V +  AL   A+   +L 
Sbjct: 244 LVKEKHWMLYFPAFVGAFFLMVPLIIIGVKRKNTKAMFQIALVIMMFALAAMAIFASNLW 303

Query: 301 AFGVAAAVFFSAFNLLEAALPSLVSRLAPEQLRGAAMGAYSTSQFIGAFVGGALGGLALG 360
              VA  +FF+ FN LEA+LPSL+++  P   +G+AMG YSTSQF+GAF GG LGG A  
Sbjct: 304 VLSVAVLLFFTGFNYLEASLPSLIAKFCPVGEKGSAMGVYSTSQFLGAFCGGMLGGGAFQ 363

Query: 361 RLGPNGVFVCAAALTLLWLPLVVSGARRITRRAATTQA 398
            +G  GVF+ A  L  +WL L +     +  ++ T +A
Sbjct: 364 LVGAVGVFIVALVLMGIWLLLTLGMKNPVLLKSYTLEA 401