Pairwise Alignments

Query, 181 a.a., sigma-70 family RNA polymerase sigma factor from Rhodanobacter sp000427505 FW510-R12

Subject, 190 a.a., RNA polymerase sigma factor RpoE from Vibrio cholerae E7946 ATCC 55056

 Score = 76.6 bits (187), Expect = 2e-19
 Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 14/169 (8%)

Query: 20  GDRQAFQRLYRLHVGRVHGAVCRLAGYDHARAEDLTQDAFIRAWQKLPGFRHESAFGTWL 79
           GD+QAF  L   +  +V   + R    +     D+ Q+AFI+A++ +P FR ESAF TWL
Sbjct: 17  GDKQAFNLLVLRYQNKVCNLISRYVS-NSGDVADVAQEAFIKAYRAIPTFRGESAFYTWL 75

Query: 80  YRLAVNVALMDIRARG-ADPVSMLDDE------------HLPDTGQTPFCAAEREELERA 126
           YR+AVN A   I A+    P S +D E             L +          ++ +  A
Sbjct: 76  YRIAVNTAKNHIVAQSRRPPASDVDAEEAEFYEGGDALKELSNPENITLSKELKKTVFDA 135

Query: 127 IARLPPRARAVLVLHDIEGWRHEEIGGELGMAIGTSKAQLHRARALLRK 175
           I  LP   +  + L +++G  +EEI   +   +GT ++++ RAR  + K
Sbjct: 136 IDALPDDLKTAMTLRELDGLSYEEIAEVMDCPVGTVRSRIFRAREAVEK 184