Pairwise Alignments

Query, 181 a.a., sigma-70 family RNA polymerase sigma factor from Rhodanobacter sp000427505 FW510-R12

Subject, 227 a.a., RNA polymerase sigma factor from Sinorhizobium meliloti 1021

 Score = 67.8 bits (164), Expect = 1e-16
 Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 15/173 (8%)

Query: 19  AGDRQAFQRLYRLHVGRVHGAVCRLAGYDHARAEDLTQDAFIRAWQKLPGFRHESAFGTW 78
           A D   F+ + + H  +++  + R    + + AED+ Q+A++RA+ +   FR ++A  TW
Sbjct: 16  AQDLARFRAIMQAHNRKLY-RIARSILRNDSDAEDVLQEAYVRAFTRFEDFRGDAAITTW 74

Query: 79  LYRLAVNVALMDIR--------------ARGADPVSMLDDEHLPDTGQTPFCAAEREELE 124
           L R+ +N AL  +R              ++ A+ ++   +  + D  +T       + +E
Sbjct: 75  LARIVINEALGRLRKGRRQMRLAKYMRQSQEAEIIAFPLNSGISDPEKTMAQRQILDLVE 134

Query: 125 RAIARLPPRARAVLVLHDIEGWRHEEIGGELGMAIGTSKAQLHRARALLRKIL 177
           R    LP   R V VL  IEG  +EE    LG+   T++ +LHRAR +L++ L
Sbjct: 135 RLTDDLPDTYRTVFVLRVIEGLDNEEAAALLGLKPETARTRLHRARRILKEQL 187