Pairwise Alignments

Query, 181 a.a., sigma-70 family RNA polymerase sigma factor from Rhodanobacter sp000427505 FW510-R12

Subject, 370 a.a., Probable alternative RNA polymerase sigma factor SigG (RNA polymerase ECF type sigma factor) from Mycobacterium tuberculosis H37Rv

 Score = 72.8 bits (177), Expect = 7e-18
 Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 35/198 (17%)

Query: 6   AGANDSDDVRAAAAGDRQAFQRLYRLHVGRVHGAVCRLAGYDHARAEDLTQDAFIRAWQK 65
           +G   +D+ R   +   + ++R    H  R+ G++     +D   AEDL Q+  +RAW+ 
Sbjct: 46  SGREPADERRGDFSAHTEPYRRELLAHCYRMTGSL-----HD---AEDLVQETLLRAWKA 97

Query: 66  LPGFRHESAFGTWLYRLAVNVALMDIRAR------------GADPVSMLDD-------EH 106
             GF  +S+  TWL+R+A N  L  +  R             ADP   L +       E 
Sbjct: 98  YEGFAGKSSLRTWLHRIATNTCLTALEGRRRRPLPTGLGRPSADPSGELVERREVSWLEP 157

Query: 107 LPDTGQTP----FCAAEREELE----RAIARLPPRARAVLVLHDIEGWRHEEIGGELGMA 158
           LPD    P         RE +      A+  L PR RAVL+L D+  W+  E+   +G +
Sbjct: 158 LPDVTDDPADPSTIVGNRESVRLAFVAALQHLSPRQRAVLLLRDVLQWKSAEVADAIGTS 217

Query: 159 IGTSKAQLHRARALLRKI 176
                + L RAR+ L+ +
Sbjct: 218 TVAVNSLLQRARSQLQTV 235