Pairwise Alignments

Query, 192 a.a., sigma-70 family RNA polymerase sigma factor from Rhodanobacter sp000427505 FW510-R12

Subject, 190 a.a., RNA polymerase sigma factor RpoE from Vibrio cholerae E7946 ATCC 55056

 Score = 79.3 bits (194), Expect = 4e-20
 Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 12/177 (6%)

Query: 9   DRELVDAVLANRPGAFERLVREYQGLCWHIIQRMVRNPEDARELCQDTFLRVHQCLHQYR 68
           D+ L++ V      AF  LV  YQ    ++I R V N  D  ++ Q+ F++ ++ +  +R
Sbjct: 7   DQVLIERVQNGDKQAFNLLVLRYQNKVCNLISRYVSNSGDVADVAQEAFIKAYRAIPTFR 66

Query: 69  GESALKSWIGRVAYTIALRHL--QHKRIALVEPGADNDFALVENLGDGFDL------EAA 120
           GESA  +W+ R+A   A  H+  Q +R     P +D D    E    G  L      E  
Sbjct: 67  GESAFYTWLYRIAVNTAKNHIVAQSRR----PPASDVDAEEAEFYEGGDALKELSNPENI 122

Query: 121 CADAETARHLHAAIEALPPLQRTLLTLYYLEETTIPEIAQITGLASGTIKSHLFRSR 177
               E  + +  AI+ALP   +T +TL  L+  +  EIA++     GT++S +FR+R
Sbjct: 123 TLSKELKKTVFDAIDALPDDLKTAMTLRELDGLSYEEIAEVMDCPVGTVRSRIFRAR 179