Pairwise Alignments

Query, 192 a.a., sigma-70 family RNA polymerase sigma factor from Rhodanobacter sp000427505 FW510-R12

Subject, 196 a.a., RNA polymerase sigma factor from Synechococcus elongatus PCC 7942

 Score = 58.2 bits (139), Expect = 9e-14
 Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 18/186 (9%)

Query: 9   DRELVDAVLANRPGAFERLVREYQGLCWHIIQRMVRNPEDARELCQDTFLRV--HQCLHQ 66
           D++L   +   +  A  RL   + GL + I  +++ NP++A +L QD F+R+   Q  H 
Sbjct: 16  DQDLWSELQQGQVAALARLYDRHAGLVYGIAMQVLGNPQEAEDLTQDIFIRLVDRQHSHY 75

Query: 67  YRGESALKSWIGRVAYTIALRHLQHKRIALVEPGADNDFALVENLGDGFDLEA------- 119
                +L++++  +  + A+  L+ +R            + +E + +    EA       
Sbjct: 76  DSKRGSLRTYLAVLTRSRAIDRLRSRR---------TQASAIERVQNQVKQEATEDPPIA 126

Query: 120 ACADAETARHLHAAIEALPPLQRTLLTLYYLEETTIPEIAQITGLASGTIKSHLFRSRLR 179
           +   AET+  +  A+  LP  Q+ +L L Y E  +  +IA+      GTIK+   R  L+
Sbjct: 127 SLGAAETSAEVQKALAQLPESQQQVLRLAYYEGLSQSDIAERLSEPLGTIKARARRGLLK 186

Query: 180 LRGALE 185
           LR  L+
Sbjct: 187 LRQMLQ 192