Pairwise Alignments

Query, 660 a.a., UvrD-helicase domain-containing protein from Rhodanobacter sp000427505 FW510-R12

Subject, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

 Score =  380 bits (977), Expect = e-110
 Identities = 238/640 (37%), Positives = 358/640 (55%), Gaps = 22/640 (3%)

Query: 2   LNPQQLAAVEHCDTPLLVLAGAGSGKTSVITQKIAYLIQRRKLAASKIAAITFTNKAARE 61
           LN +Q  AV      LL+LAGAGSGKT V+  +IA+L+   + +   + A+TFTNKAA E
Sbjct: 11  LNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAVTFTNKAAAE 70

Query: 62  MRERVAKLISSEDAAALTVSTFHALGLKFLQIEHARAGLRRGFSVLDADDSEGIVKELAP 121
           MR R+ +L+    A+ +   TFH +  + L+  +  A L   F ++D+DD + ++K L  
Sbjct: 71  MRGRIEELMHGT-ASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQQRLLKRLIK 129

Query: 122 KGAKPDVLFGLRNL---LSRAKNGGLSPEEALAAARSPRELEAATIYELYQARLATFNAV 178
                D  +  R +   ++  K+ GL P    A    P       +Y  YQ        V
Sbjct: 130 AHNLDDKQWPARQVAWWINNQKDEGLRPTHINAF--DPVTQTYLKLYTAYQEACDRAGLV 187

Query: 179 DFDDLIRLPLRILESDDECRDAWRERLRYLLVDEYQDTNDAQYRLLKVLAGERGHITCVG 238
           DF +++   L +L  +   R+ ++ R +++LVDE+QDTN  QY  L+++AG + ++  VG
Sbjct: 188 DFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGAQSNVMIVG 247

Query: 239 DDDQSIYAWRGANPENIDQLGRDWPNLRVIKLEQNYRCGRRILRAANALIAHNPHSHEKK 298
           DDDQSIY WRGA  ENI++  R++P++  I+LEQNYR  + IL A+N LIA+N     K+
Sbjct: 248 DDDQSIYGWRGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIANNSERMGKQ 307

Query: 299 LWSEHPEGAPIRVLECKEAEHEAEKIASIATTLAEKHKARWDDMAILYRGNFQARVLEKA 358
           LW++   G PI V        EA  + S      E+      D AILYR N Q+RVLE+A
Sbjct: 308 LWTDGLVGEPISVYSAYNELDEARFVVSKIKGWQEQ-GGTLTDCAILYRNNAQSRVLEEA 366

Query: 359 LRLARIPYHLTGALSFLDRAEVKDLLCYLRLLTNPSDDAAFLRVVNVPKREIGATTLEKL 418
           L  A + Y + G + F +R E+KD L YLRL+ N +DD AF RV+N P R +G  TLE +
Sbjct: 367 LLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDDTAFERVINTPPRGLGDKTLETI 426

Query: 419 GQLAQSRHSSLLDATRSDGVLRQ--LTPRPAAALASFANLLDELRSASLHQSAADLVELI 476
              A+ R  +L DA  S G+L    LT R A+AL+ F  L++ L    +      L +  
Sbjct: 427 RFAARDRGCTLWDA--SVGLLNDQVLTGRAASALSRFVELINALEEEGIDMPLHVLTDHA 484

Query: 477 LKRTGYAAQIAAGTTDATVRERKLGNLKELADWFRAMQKGGNSAGDLAAQLALLSHA--- 533
           +K +G          + +  + ++ NL+EL    R  +K    A ++    A L+HA   
Sbjct: 485 VKTSGLLEMYQQEKGEKS--KARIENLEELVTATRQFEK-PEEAQEMTMLTAFLTHAALE 541

Query: 534 ----DRDEPGNAVRMMTLHAAKGLEFRFVFIAGCEDGTLPHEGALDE-GRVDEERRLMYV 588
                 DE  +AV++MTLH+AKGLEF  VF+ G E+G  P + + +E GR++EERRL YV
Sbjct: 542 AGEGQADEHDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLCYV 601

Query: 589 GITRAKELLTLSWSAKTKRYGEVHNNQPSRFLHELPQADL 628
           G+TRA + L ++++   + YG+   ++PSRF+ ELP+  L
Sbjct: 602 GMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPEGCL 641