Pairwise Alignments

Query, 235 a.a., pseudouridine synthase from Rhodanobacter sp000427505 FW510-R12

Subject, 559 a.a., RluA family pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  100 bits (249), Expect = 6e-26
 Identities = 72/228 (31%), Positives = 111/228 (48%), Gaps = 38/228 (16%)

Query: 2   LDILYQDDALIAVNKPANLAVHRSKMVGNAEEFLIDLLREQV--GDSVYLAHRLDRATSG 59
           + I+YQDDA++ VNKPA      S    +  + ++  L+ Q    + V+  HRLD +TSG
Sbjct: 356 ITIVYQDDAIVVVNKPAEFL---SVPGVHVHDSVLTRLKAQFTQAEGVFALHRLDMSTSG 412

Query: 60  VLLVARSKEVAAALGGQFMGRLMHKRYLAVVRGWPEPAEGVIDYPLPGSRETGPRRE--- 116
           +L+ A ++     L  QF+ R + KRY+A++ G     +G I  PL G  +  PR++   
Sbjct: 413 LLVFALTRRANKQLQKQFISRAVQKRYVALIEGKLSETQGEIQLPLCGDLDDRPRQKVCW 472

Query: 117 -----ARTHYRRLATVGVPIALGRYPQQRYALLLAEPESGRFRQIRKHLAH---IHHPVI 168
                A TH+    TV V        +Q    +   P +GR  Q+R H AH   ++ P++
Sbjct: 473 QQGKPALTHWE---TVQV--------EQNRTRVYLYPHTGRTHQLRVHCAHHLGLNAPIV 521

Query: 169 GDCQHGRGDHNRLYKQHFGCHRMLLHAWRLDFRHPQTSESMSLQAPLD 216
           GD  +G  D            R+ LHA +L F HP T + M+ Q   D
Sbjct: 522 GDDLYGLQD-----------KRLFLHAEQLSFAHPYTKQPMTFQVDAD 558