Pairwise Alignments

Query, 235 a.a., pseudouridine synthase from Rhodanobacter sp000427505 FW510-R12

Subject, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

 Score = 96.3 bits (238), Expect = 6e-25
 Identities = 68/228 (29%), Positives = 106/228 (46%), Gaps = 19/228 (8%)

Query: 4   ILYQDDALIAVNKPANLAVHRSKMVGNAEEFLIDLLREQVGDSVYLAHRLDRATSGVLLV 63
           I+Y+DD L+ +NKP+  AVH    +       +  LR Q    + L HR+DR TSG+LLV
Sbjct: 97  IVYEDDHLLILNKPSGTAVHGGSGLHFGAIEALRALRPQAR-FLELVHRIDRDTSGILLV 155

Query: 64  ARSKEVAAALGGQFMGRLMHKRYLAVVRGWPEPAEGVIDYPLPGS------RETGPRREA 117
           A+ +     L  QF  + + K Y A+V G  +    V++ PL  +      R     + +
Sbjct: 156 AKKRSALRHLQAQFREKTVQKYYYALVMGHWDAECKVVNAPLLKNEVNSIVRVNPNGKPS 215

Query: 118 RTHYRRLATVGVPIALGRYPQQRYALLLAEPESGRFRQIRKHLAHIHHPVIGDCQHGRGD 177
            T +R L                  L+ A P +GR  QIR H  ++ HP+  D ++G   
Sbjct: 216 ETRFRILEKFA-----------EATLVQASPVTGRTHQIRVHTQYMGHPIAWDDRYGDRR 264

Query: 178 HNRLYKQHFGCHRMLLHAWRLDFRHPQTSESMSLQAPLDGEYRTLLER 225
            +  Y   FG  R+ LHA  + F HP + + + + APL+      L +
Sbjct: 265 FD-AYTAQFGIERLFLHAANIQFVHPASEKKLEIHAPLEAHLEQALTK 311