Pairwise Alignments

Query, 235 a.a., pseudouridine synthase from Rhodanobacter sp000427505 FW510-R12

Subject, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

 Score =  209 bits (531), Expect = 5e-59
 Identities = 105/241 (43%), Positives = 153/241 (63%), Gaps = 10/241 (4%)

Query: 1   MLDILYQDDALIAVNKPANLAVHRSKMVGNAEEFLIDLLREQVGDSVYLAHRLDRATSGV 60
           ML+I+YQD+ L+AVNKPA + VHRS +  +  EF++  LR+Q+G  V+  HRLDR TSGV
Sbjct: 1   MLEIVYQDEYLVAVNKPAGMLVHRSWLDKHETEFVMQTLRDQIGQHVFPLHRLDRPTSGV 60

Query: 61  LLVARSKEVAAALGGQFMGRLMHKRYLAVVRGWPEPAEGVIDYPLPG---------SRET 111
           L+ A S ++A+ +   F    M K Y A+VRGW E A  V+DYPL           +++ 
Sbjct: 61  LVFALSSQIASEVMPMFANHEMEKTYHAIVRGWIEEAN-VLDYPLKEELDKIADKFAKQD 119

Query: 112 GPRREARTHYRRLATVGVPIALGRYPQQRYALLLAEPESGRFRQIRKHLAHIHHPVIGDC 171
              + A T YR LA V +PIA G++   RY L+  +P++GR  Q+R+H+AH+ HP++GD 
Sbjct: 120 KEAQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIVGDT 179

Query: 172 QHGRGDHNRLYKQHFGCHRMLLHAWRLDFRHPQTSESMSLQAPLDGEYRTLLERFDWSTA 231
            HG G HNRL+++HF   R++LHA  L F HP T + + ++A LD  ++ LL  F W  +
Sbjct: 180 THGDGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPLVIRAGLDEVWQGLLSEFGWQES 239

Query: 232 L 232
           L
Sbjct: 240 L 240