Pairwise Alignments

Query, 235 a.a., pseudouridine synthase from Rhodanobacter sp000427505 FW510-R12

Subject, 323 a.a., RluA family pseudouridine synthase (RefSeq) from Shewanella loihica PV-4

 Score = 97.4 bits (241), Expect = 3e-25
 Identities = 73/225 (32%), Positives = 111/225 (49%), Gaps = 18/225 (8%)

Query: 2   LDILYQDDALIAVNKPANLAVHRSKMVGNAEEFLIDLLREQVGD-----SVYLAHRLDRA 56
           LDI+Y+DD +I +NK A L VH     GN++  L++ L     +        + HRLD+ 
Sbjct: 84  LDIVYEDDHIIVINKQAGLVVHPG--AGNSDGTLMNALLHHCPEIELVPRAGIVHRLDKD 141

Query: 57  TSGVLLVARSKEVAAALGGQFMGRLMHKRYLAVVRGWPEPAEGVIDYPLPGSRETGPRRE 116
           T+G+++VA++ E    L      R + + Y A+V G    A GV+D P+  +R    R  
Sbjct: 142 TTGLMVVAKTVEAQTHLVAALQAREITREYEAIVSG-TMTAGGVVDEPI--ARHPTKRTH 198

Query: 117 ARTHYRRLATVGVPIALGRYPQQRYALLLAEPESGRFRQIRKHLAHIHHPVIGDCQHG-- 174
              H+    +V       ++  + +  L    E+GR  QIR H+AHI H ++GD  +G  
Sbjct: 199 MAVHHSGRPSVTHYRVAEKF--RAHTRLRLRLETGRTHQIRVHMAHIGHILVGDPVYGGR 256

Query: 175 ----RGDHNRLYKQHFGCHRMLLHAWRLDFRHPQTSESMSLQAPL 215
               +     L +   G  R  LHA RL+  HP T E MS QAP+
Sbjct: 257 PRPPKKATPELMEALNGFKRQALHAVRLELAHPFTCEIMSWQAPI 301