Pairwise Alignments

Query, 459 a.a., ATP-dependent RNA helicase DbpA from Rhodanobacter sp000427505 FW510-R12

Subject, 663 a.a., DEAD/DEAH box family ATP-dependent RNA helicase from Vibrio cholerae E7946 ATCC 55056

 Score =  259 bits (663), Expect = 1e-73
 Identities = 175/464 (37%), Positives = 258/464 (55%), Gaps = 23/464 (4%)

Query: 4   FSTLPLKPALLASVDTLGYAEMTPVQAQSLPPMLQGRDVIAQAQTGSGKTAAFGLSLLQA 63
           FS L L  A+L+++  +G+   TP+QA ++P +L+GRD + +AQTG+GKTAAF L LL  
Sbjct: 28  FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87

Query: 64  LDADTIRLQALVLCPTRELADQVSKAIRKLAANIPNVKLLTLCGGMPLGPQLASLSHDPH 123
           L+    + QA+V+ PTRELA QV+  I+ L  NI  +K+L + GG  +  Q+ +L    H
Sbjct: 88  LNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 147

Query: 124 IVVGTPGRVQEHLKRGSLHGGGIKVLVLDEADRMLDMGFSEAIDDIIGRIAKHHQTLLFS 183
           IVVGTPGRV++ + R  LH       +LDEAD ML MGF + +  I+ +  +  Q +LFS
Sbjct: 148 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 207

Query: 184 ATYPDEIRAASQRVQKDPVVVTVEAPAARRSAIEQQFIEVEPAQKLDALAQLLAGERGQH 243
           AT P  ++   +R  ++P  V V       + +EQQ+  V+  +K +A+A+LL  E    
Sbjct: 208 ATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKDEAMARLLETEETDA 267

Query: 244 ALVFCNMRRDVDAVAQELDRRGYSALALHGDMEQRDRDEVLVRFANRSCNVLVATDVAAR 303
           ++VF   R+D + +A  L  RG+ A ALHGD+ Q  R+  +        ++LVATDV AR
Sbjct: 268 SIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILVATDVVAR 327

Query: 304 GLDIAALPLVLSYDVAHDPDTHTHRIGRTGRAGETGLAITLCTPR--------ERPKAAN 355
           GLD+  +  V +YD+  D +++ HRIGRTGRAG  G AI L            ER   ++
Sbjct: 328 GLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTIERVTRSS 387

Query: 356 IEEAQGVPLPWRTLKLAPPRGKTL--HLAPMK---TLVIDAGRQDKLRPGDILGALTGDA 410
           +EE Q   LP R  K+A  R   L   LA  K   +L   A   +KL+    + A T  A
Sbjct: 388 MEEIQ---LPHRD-KVAESRLTKLGQELAADKEFSSLERFADLVEKLQASLEIDATTLAA 443

Query: 411 GLEAKDIGKIDVFATRAYVAISRALANKALERLRAGRIKGRNFR 454
            L  +  GK  +F   A   I      +A+ER ++ R + R+ R
Sbjct: 444 ILLKRQQGKRPLFYVGADPMI------EAMEREKSRRRERRDDR 481



 Score = 38.1 bits (87), Expect = 9e-07
 Identities = 20/64 (31%), Positives = 33/64 (51%)

Query: 386 TLVIDAGRQDKLRPGDILGALTGDAGLEAKDIGKIDVFATRAYVAISRALANKALERLRA 445
           T  +  GR   ++  DI+GAL  + GL    IG I +     +V + +A++N    +LR 
Sbjct: 504 TYQLQVGRDQGVQVKDIVGALANELGLTKGSIGAIKLAQGHTFVQLPKAMSNDVSSKLRK 563

Query: 446 GRIK 449
            RI+
Sbjct: 564 LRIR 567