Pairwise Alignments

Query, 459 a.a., ATP-dependent RNA helicase DbpA from Rhodanobacter sp000427505 FW510-R12

Subject, 422 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

 Score =  270 bits (691), Expect = 5e-77
 Identities = 156/375 (41%), Positives = 225/375 (60%), Gaps = 8/375 (2%)

Query: 3   TFSTLPLKPALLASVDTLGYAEMTPVQAQSLPPMLQGRDVIAQAQTGSGKTAAFGLSLLQ 62
           TFS L L   LL ++  LG A  TP+Q Q++P +LQG+DV+A AQTG+GKTAAFGL L+Q
Sbjct: 7   TFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQ 66

Query: 63  AL-------DADTIRLQALVLCPTRELADQVSKAIRKLAANIPNVKLLTLCGGMPLGPQL 115
                    +A++  ++ALVL PTRELA QV  +++  A     +K++ + GG  +  QL
Sbjct: 67  RFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGT-ELKIVAVYGGTSMKVQL 125

Query: 116 ASLSHDPHIVVGTPGRVQEHLKRGSLHGGGIKVLVLDEADRMLDMGFSEAIDDIIGRIAK 175
             L     I++ TPGR+ +H    SL  G ++VLVLDEADRMLDMGF   +  ++ R++ 
Sbjct: 126 NHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSP 185

Query: 176 HHQTLLFSATYPDEIRAASQRVQKDPVVVTVEAPAARRSAIEQQFIEVEPAQKLDALAQL 235
             QTL FSAT+  +I+A + R+ +DP+ V V    +    ++Q    V+  +K + L+ L
Sbjct: 186 LRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKRELLSYL 245

Query: 236 LAGERGQHALVFCNMRRDVDAVAQELDRRGYSALALHGDMEQRDRDEVLVRFANRSCNVL 295
           +  +  Q  LVF   R+  DA+A+EL   G  A++++GD  Q  R + L  F       L
Sbjct: 246 IGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRAL 305

Query: 296 VATDVAARGLDIAALPLVLSYDVAHDPDTHTHRIGRTGRAGETGLAITLCTPRERPKAAN 355
           +ATDVAARGLDIA L  V++YD+    + + HRIGRTGRAG  GLA++L +  E+P+   
Sbjct: 306 IATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQPQLEA 365

Query: 356 IEEAQGVPLPWRTLK 370
           IE      LP   LK
Sbjct: 366 IERLLNTRLPQEWLK 380