Pairwise Alignments

Query, 459 a.a., ATP-dependent RNA helicase DbpA from Rhodanobacter sp000427505 FW510-R12

Subject, 460 a.a., ATP-dependent RNA helicase DbpA from Vibrio cholerae E7946 ATCC 55056

 Score =  454 bits (1167), Expect = e-132
 Identities = 239/457 (52%), Positives = 318/457 (69%), Gaps = 3/457 (0%)

Query: 3   TFSTLPLKPALLASVDTLGYAEMTPVQAQSLPPMLQGRDVIAQAQTGSGKTAAFGLSLLQ 62
           +F+ L LKP LLA+++T+G+A MTP+QAQSLP +L+G+DVI Q +TGSGKTAAFGL +L 
Sbjct: 5   SFAALNLKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGLGVLS 64

Query: 63  ALDADTIRLQALVLCPTRELADQVSKAIRKLAANIPNVKLLTLCGGMPLGPQLASLSHDP 122
            L+    R+QALVLCPTRELADQV+  IR L   I N+K+LTLCGGMP+GPQ+ SL H  
Sbjct: 65  NLNVKRFRVQALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSLEHGA 124

Query: 123 HIVVGTPGRVQEHLKRGSLHGGGIKVLVLDEADRMLDMGFSEAIDDIIGRIAKHHQTLLF 182
           HI+VGTPGR+ +HL +  +    +  LVLDEADRML+MGF EA++ II       QTLLF
Sbjct: 125 HILVGTPGRILDHLSKDRIDLSELNTLVLDEADRMLEMGFQEALEAIIAAAPAERQTLLF 184

Query: 183 SATYPDEIRAASQRVQKDPVVVTVEAPAARRSAIEQQFIEVE-PAQKLDALAQLLAGERG 241
           SATYP  I   +Q V ++ +++ VEA     S+I Q F +VE  A + +AL  LL   + 
Sbjct: 185 SATYPASIEQIAQSVTRNALMIKVEA-THDTSSIRQYFYKVEGSAARDEALETLLLHHQP 243

Query: 242 QHALVFCNMRRDVDAVAQELDRRGYSALALHGDMEQRDRDEVLVRFANRSCNVLVATDVA 301
             ++VFCN +R+V  VA  L + G+S + LHGDMEQR+RD+ LV+FAN+S ++LVATDVA
Sbjct: 244 TSSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILVATDVA 303

Query: 302 ARGLDIAALPLVLSYDVAHDPDTHTHRIGRTGRAGETGLAITLCTPRERPKAANIEEAQG 361
           ARGLD+  L  V +YD++ DP+ H HRIGRTGRAG  GLA +  +  E  + A I+E   
Sbjct: 304 ARGLDVDNLDAVFNYDLSRDPEVHVHRIGRTGRAGSKGLAFSFFSDNESYRVAQIDEYMD 363

Query: 362 VPLPWRTLKLAPPRGKTLHLAPMKTLVIDAGRQDKLRPGDILGALTGDAGLEAKDIGKID 421
           + +   TL   P  G   + A M T+ ID G++DK+RPGDILGALT D  L A+ IGKI+
Sbjct: 364 IAIEPSTLP-QPAAGARPYAANMVTIQIDGGKKDKVRPGDILGALTSDGELTAEHIGKIN 422

Query: 422 VFATRAYVAISRALANKALERLRAGRIKGRNFRVRPL 458
           +F  RAYVA+ + +A KAL ++  G++KGR FR R L
Sbjct: 423 LFPMRAYVAVHKKIATKALNKIANGKMKGRQFRARLL 459