Pairwise Alignments

Query, 459 a.a., ATP-dependent RNA helicase DbpA from Rhodanobacter sp000427505 FW510-R12

Subject, 578 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  253 bits (646), Expect = 1e-71
 Identities = 155/401 (38%), Positives = 233/401 (58%), Gaps = 12/401 (2%)

Query: 3   TFSTLPLKPALLASVDTLGYAEMTPVQAQSLPPMLQGRDVIAQAQTGSGKTAAFGLSLLQ 62
           +FS+L L   +  +V   GY   +P+QAQ++P +L G+DV+A AQTG+GKTA F L LL+
Sbjct: 2   SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61

Query: 63  ALD----ADTIRLQALVLCPTRELADQVSKAIRKLAANIPNVKLLTLCGGMPLGPQLASL 118
            L     A   +++ALVL PTRELA QVS+++      +P ++   + GG+P+ PQ+  L
Sbjct: 62  LLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLP-LRSAVVFGGVPINPQIQKL 120

Query: 119 SHDPHIVVGTPGRVQEHLKRGSLHGGGIKVLVLDEADRMLDMGFSEAIDDIIGRIAKHHQ 178
            H   ++V TPGR+ +  ++ ++    ++VLVLDEADRMLDMGF   I  I+  +    Q
Sbjct: 121 RHGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLPAKRQ 180

Query: 179 TLLFSATYPDEIRAASQRVQKDPVVVTVEAPAARRSAIEQQFIEVEPAQKLDALAQLLAG 238
            L+FSAT+ DEIR  ++ +   PV ++V    A  + ++Q    V+  QK   L QL+  
Sbjct: 181 NLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQKSALLIQLIKQ 240

Query: 239 ERGQHALVFCNMRRDVDAVAQELDRRGYSALALHGDMEQRDRDEVLVRFANRSCNVLVAT 298
           E  Q  LVF   +   + +A+ L +   SA A+HG+  Q  R + L  F +    VLVAT
Sbjct: 241 EDWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVAT 300

Query: 299 DVAARGLDIAALPLVLSYDVAHDPDTHTHRIGRTGRAGETGLAITLCTPRERPKAANIEE 358
           D+AARGLDI  LP V+++D+ + P+ + HRIGRTGRAG  G A++L +  E     +IE 
Sbjct: 301 DIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGALGQAVSLVSSEETKLLRDIER 360

Query: 359 AQGVPLPWRTLKLAPPRG-KTLHLAPMKTLVIDAGRQDKLR 398
                L  R L+     G   +H  P  TL    G+++K++
Sbjct: 361 -----LINRVLERQEVEGFSPVHTLPESTLNAH-GKENKIK 395