Pairwise Alignments

Query, 257 a.a., carbohydrate ABC transporter permease from Rhodanobacter sp000427505 FW510-R12

Subject, 272 a.a., ABC transporter for Lactose, permease component 2 (from data) from Sinorhizobium meliloti 1021

 Score =  174 bits (441), Expect = 2e-48
 Identities = 92/256 (35%), Positives = 145/256 (56%), Gaps = 3/256 (1%)

Query: 1   MAAVALFPLLWMLSVSFMAPGEASALPPPLLPKHPSGTNYRELFVRAGMGRYLLNSVLVA 60
           MA +++FP +WM  V          +   LLP     TN    F    +     NS  +A
Sbjct: 20  MAFLSVFPFIWM--VLGATNSSIDIIKGKLLPGAAFATNVANFFTLVNVPLVFWNSAKIA 77

Query: 61  GAITALSLVFNLMAGYAFAKLRFAGRERLFQALLGALVIPAQVAMLPLFLLLKYLGLVNS 120
              T L+L  + +AGY F   R   RER+++A+L  L+IP    M+PLF+++   GL+N+
Sbjct: 78  IVATVLTLAVSSLAGYGFEMFRSRRRERVYRAMLLTLMIPFAALMIPLFVMMGKAGLINT 137

Query: 121 YAGVIAPALASVFGIFLVRQYARDIPDELLEAARIDGAGEWHIFARIVLPLLKPIIVTLA 180
           +  V+ P++ S F IF  RQ  +  P EL +AA++DG  EW IF  I +P+++       
Sbjct: 138 HLAVVLPSIGSAFVIFYFRQSTKAFPSELRDAAKVDGLKEWQIFLFIYVPVMRSTYAAAF 197

Query: 181 IFSFLAAWNDFMWPLIVLTGQEHYTLPIGLASLAREHAQDSELMMAGSVVTVLPVLALFL 240
           +  F+ AWN+++WPLIVL   E  T+ + ++SLA  +  D  ++M G+++  LP LA+F 
Sbjct: 198 VIVFMTAWNNYLWPLIVLQTNETKTITLVISSLASAYYPDYGVVMVGTILATLPTLAVFF 257

Query: 241 ALQRHYLQGLLLGSVK 256
            +QR ++QG +LGSVK
Sbjct: 258 FMQRQFVQG-MLGSVK 272