Pairwise Alignments

Query, 257 a.a., carbohydrate ABC transporter permease from Rhodanobacter sp000427505 FW510-R12

Subject, 288 a.a., ABC transporter for L-Fucose, permease component 2 (from data) from Sinorhizobium meliloti 1021

 Score =  148 bits (374), Expect = 1e-40
 Identities = 88/261 (33%), Positives = 132/261 (50%), Gaps = 7/261 (2%)

Query: 4   VALFPLLWMLSVSFMAPGEASALPPPLLPKHPSGTNYRELFVRAGMGR-----YLLNSVL 58
           V   P LW++  S     E  A PP  +P+  S   YR +F  AG G      Y  NS++
Sbjct: 28  VICLPGLWIVLSSLRPTVEIMAKPPVWIPETLSLDAYRAMFSGAGQGGVPVWDYFRNSLI 87

Query: 59  VAGAITALSLVFNLMAGYAFAKLRFAGRERLFQALLGALVIPAQVAMLPLFLLLKYLGLV 118
           V+   T ++L   L  GYAFA+ RF  +  +F   +    +P     LPLF+L    G++
Sbjct: 88  VSVTSTVIALAIGLSGGYAFARYRFKAKSAIFLGFMLTRAVPGIALSLPLFMLYARTGII 147

Query: 119 NSYAGVIAP--ALASVFGIFLVRQYARDIPDELLEAARIDGAGEWHIFARIVLPLLKPII 176
           +++  +I    AL   F I+L+  + R +P +L EAA+IDG   W  F ++  PL  P I
Sbjct: 148 DTHFSLILTYVALNVPFTIWLIDGFFRQVPKDLAEAAQIDGCTPWQAFWQVEFPLAGPGI 207

Query: 177 VTLAIFSFLAAWNDFMWPLIVLTGQEHYTLPIGLASLAREHAQDSELMMAGSVVTVLPVL 236
            +  IF+FL +WN++     +       TLP+GL     E   D   M A +VV ++P L
Sbjct: 208 ASAGIFAFLTSWNEYALASQITRSVNSKTLPVGLLDYTAEFTIDWRGMCALAVVMIVPAL 267

Query: 237 ALFLALQRHYLQGLLLGSVKG 257
            L   +Q+H + GL  G+VKG
Sbjct: 268 TLTFIIQKHLVSGLTFGAVKG 288