Pairwise Alignments

Query, 481 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Rhodanobacter sp000427505 FW510-R12

Subject, 486 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 73.9 bits (180), Expect = 1e-17
 Identities = 105/396 (26%), Positives = 145/396 (36%), Gaps = 75/396 (18%)

Query: 105 VLAVAGTHGKTTTTSLLAHLLESAGMAPGFLVGGVPGNFGVSARLGGRQAYAGPGPSSGA 164
           V+ V GT+GKTT T LL HL  SAG   G L               G  +Y  PG    A
Sbjct: 104 VVGVTGTNGKTTITYLLEHLFASAGRRCGVL---------------GTVSYRWPGHVEAA 148

Query: 165 ARHLPPEGEGSVVPPMAAPFVIEADE---------YDTAFFDKRS------KFVHYRPRI 209
                         P+  P  ++  E          D AF +  S      +    R   
Sbjct: 149 --------------PLTTPDCLQLHEMLGQMAGAGVDVAFMEVSSHALDQERVAGIRFAG 194

Query: 210 AILNNLEYDHADIFPDVAAIQRQFHHLVRTVPGNGR-LIVNAHD----ERLAEVLAMGCW 264
           A+L NL  DH D   D+         L R +P  G+   VNA D      LA++     +
Sbjct: 195 AVLTNLTQDHLDYHGDMETYFNAKARLFRELPEVGKHCAVNADDPWGRRLLADLPGAVGF 254

Query: 265 TPVESFGIGTGDWQAELIEADGSAFRVTHHGEG-VGEVRWSLLGQHSVMNALAALAAAAV 323
               +   GT     E++    +   +  H EG   EV   L+G H+  N LA  A    
Sbjct: 255 ALTGAPVSGTRHLHGEMLRCSTAGVHLRMHFEGRTWEVDSPLVGAHNASNLLAVQAVGLG 314

Query: 324 AGADPQVLLPAFASFESVKRRMELVGEVNGVRVYDDFAHHPTAIATTLAGLRAKVGSARI 383
            G  P   +    +F  V  R+E +    G+ V+ D+AH P A+   L  LR  VG  RI
Sbjct: 315 LGLSPADFV-HLENFTGVPGRLERITNDRGLDVFVDYAHTPDALVNVLRALR-DVGFTRI 372

Query: 384 LVALEPRSNSMRQ---------GAHAEALA-----PSLADADAVVFLHRPELSWDAGRVT 429
           +       N  R           AHA+        P   D  A++   +P L+  A  V 
Sbjct: 373 VTVFGCGGNRDRTKRPLMGAAVAAHADVAVLTSDNPRHEDPLAIMEDVKPGLA-GAREVV 431

Query: 430 AALGGRGATAPTVDALIAALRAQARAGDQVIFMSNG 465
           A    R A A  ++ L        R GD ++    G
Sbjct: 432 AEADRRKAIALALEML--------RPGDALLVAGKG 459