Pairwise Alignments

Query, 233 a.a., polysaccharide deacetylase family protein from Rhodanobacter sp000427505 FW510-R12

Subject, 590 a.a., polysaccharide deacetylase from Vibrio cholerae E7946 ATCC 55056

 Score =  119 bits (299), Expect = 1e-31
 Identities = 71/218 (32%), Positives = 120/218 (55%), Gaps = 10/218 (4%)

Query: 1   MYHNIARAPPDLRVYRSLFVSPAAFARQMWLLRRLGYRGLSMS--AAMPYLRGERSG-RV 57
           MYH   R   +  V+ + ++      +   LL+++G+  L+    +   ++   + G R 
Sbjct: 351 MYHRFIRDDSEKGVHGT-YLHVQQLEKHFQLLKKMGFETLTFKDLSEKGFIHRLQPGKRF 409

Query: 58  AVITLDDGYVDNLDAALPILQRHGFSATCYVVSGSIGRYNQWDAERLGVRK---PLMSAE 114
            +IT+DDGY DN D  LP+L+++ F A  YVV+G    +N+WD E     +   PLMS E
Sbjct: 410 IIITVDDGYRDNYDLLLPLLKKYQFKAVVYVVTGE--NFNRWDVEVSDNPEKVVPLMSPE 467

Query: 115 QLRDWHRGGM-EIGAHSRSHPRLTQCSDAQLHDEIHGSKATLEDRLGTPVSQFCYPYGDA 173
           Q++  H  G+ EIG H+ +HP L++ S+++  +EI  +K  LE  +G P++ F YPYGD 
Sbjct: 468 QVKALHDSGLVEIGGHTMTHPFLSKLSESEQREEILRNKLELEALIGEPLTSFAYPYGDH 527

Query: 174 DDRVAGVAREAGFDAATTTRRGRAIAGMDLWQLPRVQV 211
           D     +A++ G+  A  T  G  +   D +Q+ R+ +
Sbjct: 528 DATSKQLAQDLGYPFAVATNSGPLLMHQDPYQIRRIAI 565