Pairwise Alignments

Query, 401 a.a., ABC transporter permease subunit from Rhodanobacter sp000427505 FW510-R12

Subject, 378 a.a., ABC-2 type transporter (RefSeq) from Shewanella loihica PV-4

 Score =  186 bits (471), Expect = 1e-51
 Identities = 114/389 (29%), Positives = 214/389 (55%), Gaps = 20/389 (5%)

Query: 12  SAFLTVFLKEVKENLRDRRTLMSAF---LTGPLLGPLLFVMLINLTLNRELDKAEQPLPV 68
           S+ +T+  KE+ +  RD+R++M+     +  PL+   +F++LI    + E       L +
Sbjct: 3   SSIITMVRKELTDAARDKRSVMAGLYYAIGAPLMMCGMFMILIGQITSPEA------LNI 56

Query: 69  PVIGAEYAPNLMNALKAGGVLAAAPVADPAPAVRKQDADVVLRVAPGYGKAWRQGEPVQV 128
            +   E AP+L+        LA+  ++    A RK+   + L ++P Y     + +  ++
Sbjct: 57  TITHGERAPDLVK------YLASNEISQGDEADRKE---IELVISPDYAANMAKSQAAEI 107

Query: 129 ELFYDSSQRDANSSVERVTQLVEGYARQQGAMRLVARGLSPSTAWPLQVARRDQATPQSR 188
            L  D+S     SS+ R+ + ++ Y+ + G++RL+ARG+ P    P++V   DQAT  S+
Sbjct: 108 VLIADNSNEKLQSSIRRLEKALQQYSAEIGSLRLIARGIDPKVMQPIKVKVEDQATSDSK 167

Query: 189 AVLMFAMLPYFFVITIFMGGMYLAIDLTAGERERQSLEPLFANPVARWKILCGKLAAICA 248
             ++  +  +  V  +F+ GM LAID +AGERER SL  L ++PV+   I+  K+AA+  
Sbjct: 168 GGMILGVAIFMMVYAVFISGMNLAIDTSAGERERNSLALLLSHPVSTRDIVLAKVAAVTI 227

Query: 249 FSTASLLITLLAFAVVGQFIPAEKIGMELDLGLHFATYALLLMLPLVLLLAALQSMVAAF 308
           F+   L++TL+   V   F+P +++G  +++ + F    L + LP+ L+ AALQ  V+  
Sbjct: 228 FAMLGLILTLVISKVAYGFVPWQELGFSVNINVDFILLMLAIGLPIALMAAALQLFVSFM 287

Query: 309 AKSYREAQTYISLLMLVPIIPSLLLSFMPIKAQAWMYAVPLLGQNLGIMQLLRGDGVSAA 368
           AKS++EAQ+Y++++++VP++ S+  S+    A   +  +P+ GQ   ++  ++G  +   
Sbjct: 288 AKSFKEAQSYLTIVLIVPMMLSMAASYN--IAPDTLQWLPISGQMQALIAFIKGKEIPMM 345

Query: 369 QIGLCLAGSLAAALIALLATAQLYRSEKL 397
           Q+ L  A +   AL   L   +  +SEK+
Sbjct: 346 QLALSSAITFVIALALALGMERSLKSEKI 374