Pairwise Alignments

Query, 239 a.a., pseudouridine synthase from Rhodanobacter sp000427505 FW510-R12

Subject, 340 a.a., 23S rRNA pseudouridine(2604) synthase RluF from Vibrio cholerae E7946 ATCC 55056

 Score =  250 bits (638), Expect = 3e-71
 Identities = 126/232 (54%), Positives = 168/232 (72%), Gaps = 8/232 (3%)

Query: 2   RVNKYISEAGLCSRREADEWLAAGRVTINGEVVSTGAKALEGDEVRVDGEIVKARILAAT 61
           R+NK+ISE G CSRREAD+ +  GRVT+NG     G+K  E DEV +DG+ ++++     
Sbjct: 20  RLNKFISETGYCSRREADKLIEQGRVTLNGLQPEVGSKVTEQDEVCIDGKPLRSK----- 74

Query: 62  PAAKKAVYIALNKPVGVTCTTDQAVAGNIVDFVDHPQRIFPIGRLDKDSEGLILLTSNGD 121
              ++ +YIALNKP G+TCTT++ V GNIVDF+ H +RIFPIGRLDK S+GLI LT++GD
Sbjct: 75  ---ERPIYIALNKPTGITCTTERDVPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDGD 131

Query: 122 IVNEILRAENHHEKEYLVAVNKAVTDEFLAGMAKGVRIHGQMTRPCRTRRIAKFGFSIVL 181
           IVN+ILRA N+HEKEY+V V+K +T EF+  M+ GV I   +T PC+  +  ++ F IVL
Sbjct: 132 IVNKILRAGNNHEKEYVVRVDKPITPEFIRQMSSGVNILDTVTLPCKVTQETQYSFRIVL 191

Query: 182 TQGLNRQIRLMAAAFGYRVTQLRRVRIDNVKLGHLKPGQWRNLTEAELKGLL 233
           TQGLNRQIR M  A GY V +LRRVRI N+ L  +  G+WR L+EAE+  +L
Sbjct: 192 TQGLNRQIRRMCEALGYEVFKLRRVRIMNITLDGIPNGKWRYLSEAEVSEIL 243