Pairwise Alignments

Query, 588 a.a., ABC transporter ATP-binding protein/permease from Rhodanobacter sp000427505 FW510-R12

Subject, 605 a.a., lipid A export permease/ATP-binding protein MsbA from Pseudomonas stutzeri RCH2

 Score = 94.7 bits (234), Expect = 9e-24
 Identities = 107/456 (23%), Positives = 193/456 (42%), Gaps = 17/456 (3%)

Query: 112 LRRAAHARLIEAPLSSLADATSAEIANVLTHNVELIVQGFS-ALQQLLIAGVSAAVSLGF 170
           LR A    ++  P        S  + + +T+NV ++    + A++ ++  G++       
Sbjct: 117 LRLALFNNMLTLPNRYFDSHNSGHLISRITYNVTMVTGAATDAIKVVVREGMTVIFLFAT 176

Query: 171 AFWVSPPL---MLAAPVLMGLGLLASRAYGREQSLVARQYVVDMTRLFWHSEDFPRRLRH 227
             W++  L   MLA   ++G  + ++    R+QS   +  + D+T +   + +  +  R 
Sbjct: 177 LLWMNWKLTLVMLAILPVIGFMVSSASKKFRKQSKKIQLAMGDVTHV---ASETIQGYRV 233

Query: 228 VRSFEREAAEQASYGAISGRLCHGYRRQLELVASGRLLLELLAAAGIAALFVLAHRWHGV 287
           VRSF  E  E+  +   S        R ++  A     L+L+  + +A L  L     G 
Sbjct: 234 VRSFGGEPYERNRFLTASSENTAKQLRMVKTNAVYTPSLQLVIYSAMAVLMFLVLLLRGD 293

Query: 288 EQA-ELIAVCLLLGRLLPYLVTTRQSFQQLRSAAPAFELWQRYMNLEPVYASAASPQADA 346
             A +L+A   L G L   +    +    ++      E     ++ EP        +   
Sbjct: 294 ASAGDLVAYITLAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDEEPEIDQGTLEREAV 353

Query: 347 SGAALHIERMRLTPPPGGLEIG---GLVLRPGELTLVCGDSGIGKSSLVDVLAGMMTPEV 403
           SG  L +  +    P    ++       + PG++  + G SG GKS+L +++      E 
Sbjct: 354 SGH-LEVRNLDFVYPGTDKQVLRDISFTIEPGQMVALVGRSGSGKSTLANLIPRFYHHEA 412

Query: 404 FVAHRDGRPIDFGAYRELVRHGAYVSQDVRPWQHSVRECLRWAAPDATDAMLCD---ALA 460
                DG  ++    R L RH A V+Q V  +  +V   + +   D   A L D   A  
Sbjct: 413 GQILLDGADVESYTLRNLRRHIALVTQQVTLFNDTVANNIAYG--DLAGAPLDDIRRAAR 470

Query: 461 DVGLDKRLAEAPQGLDTELRGASSRLSGGELQRLLLAQVILRQPFLAVLDEATSALDAAS 520
           D   D+ + + P+G  T +      LSGG+ QRL +A+ +L+   + +LDEATSALD  S
Sbjct: 471 DAYADEFIEQMPEGYQTLVGENGVLLSGGQRQRLAIARALLKNSPVLILDEATSALDTES 530

Query: 521 ETAVLATIRRRLPQTILVVVSHRPGVAAIADRYLTI 556
           E  +   +   +     +V++HR      AD+ L +
Sbjct: 531 ERHIQGALDHVMQGRTTLVIAHRLSTIEKADQILVM 566