Pairwise Alignments

Query, 1005 a.a., DEAD/DEAH box helicase from Rhodanobacter denitrificans FW104-10B01

Subject, 858 a.a., DEAD/DEAH box helicase from Erwinia tracheiphila SCR3

 Score =  533 bits (1374), Expect = e-155
 Identities = 326/779 (41%), Positives = 452/779 (58%), Gaps = 26/779 (3%)

Query: 230  ATRVPLPLVFDEVRRSALAPKPVLTLHALTRHV----RLAAGTPPLGYARLAFDYAGERL 285
            A++ P+P      +  ++ P P + L + T+ V            L +A + FDY G  +
Sbjct: 95   ASQAPMPAA----KLPSVEPVPAIRLESRTKFVSGFGHYGHRQKRLDFAAVHFDYGGVEV 150

Query: 286  PA-RGGEPLVRRVRNGQLVEITRRRAEELSAMEQLERAGLTPGVDTEGLPWDVAETLPDD 344
             A   GE    R   G L  I RR   E + + +L +AGL   +    +    +  LP D
Sbjct: 151  AAGSSGEHFCDR--QGTLFRIERRPELEQNWLRELSQAGLQT-LSAGHIYTPESSPLPPD 207

Query: 345  AWLFPGTGYAGALEVNTPARWLALRPKLEAENFQVEYAPSFPFEVLEGPVHWYGQAVEDA 404
                    +A AL V          P L   +++V     F + V+E  ++     V   
Sbjct: 208  I-------FAPALPVQWRDFIRQKLPLLRKHSWKVSIDDDFTWNVIE--LNGIDGYVIQD 258

Query: 405  DDHAFDLEIGIELDGERHNLLPAVAQALA-EHQLNLRPAPNEPEDAVWYAPVDARRRVPV 463
            +D  F LEIG+ +   +  L P +A     + +          ++ V     +   R+ +
Sbjct: 259  NDGWFQLEIGVRVGRRQVALQPLLAGLFQKDSRWQSGDLSRISDEEVIELRTERNERLHI 318

Query: 464  RLKELRGLLAPLAE-YLEKPRQKLHLPRVQAGRLEELVAAMPGGSTLEAAEPLLGFAARL 522
                L+ ++  LA+ + +  +  L +   + GRL  +  +  G    +         +RL
Sbjct: 319  TADHLKMVVGNLADIFADSVQGTLRIAPCEIGRL--IALSESGHWQFQQESRAYQLVSRL 376

Query: 523  RDAAERASDAVPDGLTVELRPYQREGLRWLNALAEAGVGGVLADDMGLGKTLQLITHLLS 582
            R A    +   P  L  +LR YQ++GL W+  L    + GVLADDMGLGKT+Q + HLLS
Sbjct: 377  RSAEGIEAVKPPPALRAQLRDYQQQGLNWMQFLRAHSLSGVLADDMGLGKTIQTLAHLLS 436

Query: 583  LKQGGALTQPALIVVPTSLIPNWQSEIARFAPMLHVLTLHGPQRAEEFAQLGAQDIVLTS 642
             K GG L +P+LIVVPT+L+ NW  E  RFAP L VL L GPQR + + Q+   D+VLT+
Sbjct: 437  EKDGGRLDRPSLIVVPTTLVYNWMQEAERFAPTLRVLALTGPQRKDFYGQIEQYDVVLTT 496

Query: 643  YALLPRDVVALRKQPFALIVLDEAQQVKNPRTQARRALLSLRTPRYVCLTGTPLENHLGE 702
            Y+LL RD   L    + L++LDEAQ VKN  ++A   + +L+    +CLTGTPLENHLGE
Sbjct: 497  YSLLWRDQPQLLSYRYHLLILDEAQYVKNSASRASSVIRALKARHRLCLTGTPLENHLGE 556

Query: 703  LWSQVDLAVPGLLGDESAFRRFYRIPIEKQHDEECQQRLNLRIAPFILRRSKAQVAKELP 762
            LW+Q D  +PG LG+E  F + +RIPIE+  D   ++ L+ R+ PF+LRR K  VAKELP
Sbjct: 557  LWAQFDFLLPGFLGNEKQFMQTWRIPIERHGDRVRRELLSRRVRPFMLRRRKQDVAKELP 616

Query: 763  PKTEITRRVVLEGRQRDLYEGLRLSLAEELREVIAQRGIAHSGIVVLDALLKLRQVCCDP 822
            PK+ I R V LE  Q  LYE +R  + + ++  + Q+    S +VVLDALLKLRQ+CCDP
Sbjct: 617  PKSTIIRSVRLEDTQLALYESVRSVMQQRIKLAMEQQAAGRSHLVVLDALLKLRQICCDP 676

Query: 823  RLVKLEAARGVHESAKFELLMDMLPALLDEGRKVLLFSQFTGMLKLIAAELDRRRIRYVT 882
            +L+K++ A  V  SAK  LL +ML  LL + R +L+FSQFT ML LIA EL +  I +VT
Sbjct: 677  QLIKMDEAFRVKSSAKMTLLREMLNDLLADDRHILIFSQFTSMLALIADELTKSGISFVT 736

Query: 883  LTGDTRDRAEPVQRFQNGEVPLFLLSLKAGGVGLNLTAADTVIHYDPWWNPAAEAQASDR 942
            LTG+TRDR EPV+RFQNGEVP+FL+SLK GGVGLNLTAADTVIHYDPWWNPAAE QASDR
Sbjct: 737  LTGNTRDRTEPVRRFQNGEVPVFLISLKVGGVGLNLTAADTVIHYDPWWNPAAENQASDR 796

Query: 943  AHRIGQDKPVFVFRLITSGTVEERIEQLKERKAELAAAVLEGGGSREKLSFDEGDLDTL 1001
            A R+GQDKPVFV++LI +GT+EE+I  L+++KA+LA  +L+ G S   L F   DL  L
Sbjct: 797  AWRLGQDKPVFVYKLIAAGTIEEKIVALQQQKADLAEGILQDGLSDTTL-FSNEDLAML 854