Pairwise Alignments

Query, 480 a.a., L-Proline/Glycine betaine transporter ProP from Pseudomonas fluorescens FW300-N2E2

Subject, 438 a.a., shikimate transporter (NCBI) from Escherichia coli BW25113

 Score =  245 bits (626), Expect = 2e-69
 Identities = 137/429 (31%), Positives = 240/429 (55%), Gaps = 14/429 (3%)

Query: 11  SKRQSKKAAASGWIGSALEYYDFFIYATAAALLFPQLFFPSDNPTVGIIISLASFGVGYI 70
           S  ++++AA   + G+ +++YDF +Y   AAL+F + FFP  +P +G + + A+FGVG++
Sbjct: 16  SLSRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAMGTLAAFATFGVGFL 75

Query: 71  ARPIGAVVLGHMGDRHGRKTVLVYCMFLMGASTMCIGLLPTYAQIGIWAPSLLILLRLIQ 130
            RP+G V+ GH GDR GRK +L+  +++MG +T  IG+LP+++ IG WAP LL+ LR IQ
Sbjct: 76  FRPLGGVIFGHFGDRLGRKRMLMLTVWMMGIATALIGILPSFSTIGWWAPILLVTLRAIQ 135

Query: 131 GFAVAGEVSCASSMTLEHAPDGRRGYFASFTLQGVQAGQLLAAAVFLPLAQFMPADQFAS 190
           GFAV GE   A+ +++E AP  ++ +++S    G   G LL+  +   ++     +QF S
Sbjct: 136 GFAVGGEWGGAALLSVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLS 195

Query: 191 WGWRIPFLLSAVVLVMGWIIRRQVHEAPIFTEAQTH--TEPRKLPVIEVLTQSWGDLLRV 248
           WGWRIPFL S V+++    +R  + E+  F + Q +     +++PVIE L +  G  L++
Sbjct: 196 WGWRIPFLFSIVLVLGALWVRNGMEESAEFEQQQHYQAAAKKRIPVIEALLRHPGAFLKI 255

Query: 249 ICMALSAVLAI-VASVFGATYAVQPAYGIGFPSGLFMWIPVLGNICAVILIPFVGKLSDR 307
           I + L  +L + + + F   Y+ Q    +G P  LF+ I +L    + + IP    L+DR
Sbjct: 256 IALRLCELLTMYIVTAFALNYSTQ---NMGLPRELFLNIGLLVGGLSCLTIPCFAWLADR 312

Query: 308 IGRKPPVIVGVLCGGVLSFGYLYAISIHNMWLSLVLSLLMWGVAYQGFNGVFPSLFPELF 367
            GR+   I G L G + +F +  A+   +++  +  S+++  +A+     V   +F E+F
Sbjct: 313 FGRRRVYITGTLIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMF 372

Query: 368 RTRVRVTGMAIGQN----IGVACTAFLPALFVSVAPPGSENIPLKIGALTFGICLISAIA 423
               R +G  +G      +G   T F+ A  ++       ++ + +       CLISA+ 
Sbjct: 373 GASYRYSGAGVGYQVASVVGGGFTPFIAAALITYFAGNWHSVAIYL----LAGCLISAMT 428

Query: 424 AITTRETFR 432
           A+  +++ R
Sbjct: 429 ALLMKDSQR 437