Pairwise Alignments

Query, 1026 a.a., Cation efflux system protein from Pseudomonas fluorescens FW300-N2E2

Subject, 1021 a.a., multidrug transporter AcrB from Pseudomonas simiae WCS417

 Score =  788 bits (2035), Expect = 0.0
 Identities = 424/1022 (41%), Positives = 647/1022 (63%), Gaps = 12/1022 (1%)

Query: 1    MSFNLSALAVRERAITVFLIFLIAVAGTLAFFKLGRAEDPPFTVKQLTVITAWPGATARE 60
            M FNLS  A+R R I +FL+ L+AV GTL++ KLG++EDPPFT K + + T WPGATA+E
Sbjct: 1    MGFNLSEWALRNRQIVLFLMILLAVVGTLSYSKLGQSEDPPFTFKAMVIKTNWPGATAQE 60

Query: 61   MQDQVAEPLEKRLQELKWYDRSETYTRPGLAFTMVSLLDRTPPSQVQEEFYQARKKLDDE 120
            +  QV E +EK+L E   Y+R  +++RPG +       D    +Q+ E +YQ RKK+ D 
Sbjct: 61   VSRQVTERIEKKLMETGEYERIVSFSRPGESQVTFIARDSMHSAQIPELWYQVRKKISDI 120

Query: 121  ATKLPAGVIGPLVNDEYSDVTFALFALKAKGEPQRLLVRDAEVLRQRLLHVAGVKKVNII 180
               LP  + GP  NDE+      ++AL   G    +L   A+ ++ +L  VA V KV ++
Sbjct: 121  RQTLPPDIQGPFFNDEFGTTFGNIYALTGDGFDYAVLKDYADRIQIQLQRVADVGKVELL 180

Query: 181  GEQAERIFISFSHDRLATLGVSPQDIFAALNSQNVLTPAGSIETKGPQVFLRVEGAFDTL 240
            G Q E+I+I  S+ +LATLG+    +  AL  QN ++ AG  ET   +V LRV G F T+
Sbjct: 181  GLQDEKIWIELSNLKLATLGLPLAAVQQALQEQNAVSTAGFFETPSERVQLRVSGNFKTV 240

Query: 241  EKIRDTPLTIQGRTLKLSDVATVERGYEDPATFLVRNNGEEALLLGVIMREGWNGLDLGK 300
            E+IR+ P+ +  RT ++ DVA + RG+ DP    +R  G +A+ L V MR+G + L LGK
Sbjct: 241  EEIRNFPIRVGDRTFRIGDVADIHRGFNDPPAPRMRYMGADAIGLAVAMRDGGDILVLGK 300

Query: 301  ALDAETSKINEDMPLGMTLTKVTDQAVNIDSAVGEFMVKFFVALLVVMLVCFLSMGWRVG 360
            AL+ E +++ +++P GM L KV+DQ   + ++VGEF+     AL +V+LV F S+G R G
Sbjct: 301  ALEGEFARLQKNLPAGMELRKVSDQPAAVKTSVGEFVQVLAEALAIVLLVSFFSLGVRTG 360

Query: 361  VVVAAAVPLTLAIVFVVMAATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGYD 420
            +VVA A+PL LA+ F  M   G    +I+LG+L+LALGLLVDDAIIA+EMM +KME+GYD
Sbjct: 361  MVVALAIPLVLAMTFATMYYLGIGLHKISLGALVLALGLLVDDAIIAVEMMAIKMEQGYD 420

Query: 421  RIKASAYAWSHTAAPMLSGTLVTAIGFMPNGFAQSTAGEYTSNMFWIVGIALIASWVVAV 480
            R+KA+++AW+ TA PML+GTL+TA GF+P   AQS+ GEYT ++F +V IAL+ASWV AV
Sbjct: 421  RLKAASFAWTSTAFPMLTGTLITAAGFLPIATAQSSTGEYTRSIFQVVTIALLASWVAAV 480

Query: 481  AFTPYLGMKMLPDIKPVEGGHAA--------IYNTRHYNRFRQVLARVISHKWLVAGTVI 532
             F PYLG K+LPD+  +   HAA         Y T  Y R R+++   +  +  V    +
Sbjct: 481  VFVPYLGEKLLPDLAKI---HAAKHGTDGPDPYGTPFYQRVRRMVEWCVRRRKTVIVLTL 537

Query: 533  TLFVVAVLGMGLVKKQFFPTSDRPEVMVEVQMPYGTSIEQTSAATAKVEAWLQKQAEAKI 592
             LF+ +V     V +QFFP S R E+MV++++  G S+  T+    ++EA L++ A    
Sbjct: 538  LLFIGSVALFRFVPQQFFPASGRLELMVDLKLAEGASLSNTADQVKRLEALLKEHAGIDN 597

Query: 593  VTAYIGQGAPRFFLAMAPELPDPSFAKIVVLTDSQEARETLKFRLREAVAAGLAPEARVR 652
              AY+G G+PRF+L +  +LP  SFA+ VVL  + E RE+L+  L + +     P+ R R
Sbjct: 598  YVAYVGTGSPRFYLPLDQQLPAASFAQFVVLAKTIEERESLRTWLIQTLNEQF-PDLRSR 656

Query: 653  ATQIVFGPYSPFPVAYRVMGPDPTKLREIAARVQDVMQASPMMRTVNTDWGPLVPTLHFN 712
             T++  GP   +PV +RV G    ++R +A +V   ++ +P +  V+ DW      ++ N
Sbjct: 657  VTRLENGPPVGYPVQFRVTGEHIEEVRALARKVAVKVRENPHVANVHLDWEEPSKIVYLN 716

Query: 713  LDQDRLQAVGLTSSAVAEQLQFLLAGVPITAVREDIRSVQVVGRAAGDIRLDPARIEGFT 772
            +DQDR +A+G++++ +++ LQ  L G  ++  RED   ++++ R     R + + +    
Sbjct: 717  IDQDRARALGVSTANLSKFLQSSLTGSSVSQYREDNELIEILLRGTVHERTELSLLPSLA 776

Query: 773  LVGAAGQRIPLSQVGEVDVRMEDPILRRRDRTPTITVRGDIAEGLQPPDVSSAMLVLLQP 832
            +    G+ + LSQ+  ++   E+ I+  R+R PT+T+R DI    QP  +   +L  L+ 
Sbjct: 777  VPTDNGKSVALSQIATLEYGFEEGIIWHRNRLPTVTIRADIYGKEQPATLVQQILPTLEG 836

Query: 833  ILDTLPDGYRIQQAGAIEESGKANQAILPLLPIMVALTLLIIIVQVRSISAMLMVFLTAP 892
            +   LPDGY +   G +E+S +   ++   +P+ + + L ++++Q+RS S   MVFLTAP
Sbjct: 837  VRAELPDGYLLDVGGTVEDSARGQNSVKAGVPLFIVVVLTLLMLQLRSFSRTAMVFLTAP 896

Query: 893  LGLIGVVPMLLIFQQPFGINALVGLIALSGILMRNTLILIGQIHHNAQEGLDPFNAVIEA 952
            LGLIGV   LL+F+QPFG  A++G IALSG++MRN++IL+ QI  + + GL P+ A+IEA
Sbjct: 897  LGLIGVTLFLLVFRQPFGFVAMLGTIALSGMIMRNSVILVDQIEQDIKAGLAPWQAIIEA 956

Query: 953  TVQRARPVLLTALAAILAFIPLTHSVFWGTLAYTLIGGTFVGTLMTLVFLPAMYSIWFKI 1012
            TV+R RP++LTALAA+LA IPL+ SVF+G +A  ++GG  V T +TL+FLPA+Y+ WF++
Sbjct: 957  TVRRFRPIVLTALAAVLAMIPLSRSVFFGPMAVAIMGGLIVATALTLLFLPALYAAWFRV 1016

Query: 1013 RP 1014
            +P
Sbjct: 1017 KP 1018