Pairwise Alignments

Query, 298 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

Subject, 297 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  167 bits (424), Expect = 2e-46
 Identities = 98/279 (35%), Positives = 156/279 (55%), Gaps = 4/279 (1%)

Query: 3   ELAQLRCFTTVATELNFRRAAERLNMTQPPLSRQIQLLEHHLGVELFTRSTRSVALTAAG 62
           EL  LR F  VA EL+F RAA RLN++QPPLS+QIQ LE  +G  L  R+ RSV LTAAG
Sbjct: 4   ELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNRSVLLTAAG 63

Query: 63  RAFFIEAQNLLEQAQQAAIAARRFAQGDIGSVTISFVGSAVY-EFLPKVIAEARLKQPQV 121
           + F  +++ +L     AA  A R  QG+ G + I F  SA +   +   ++  R   P V
Sbjct: 64  KQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSSAPFIRAVSDTLSLFRRDYPDV 123

Query: 122 KIVLAEMNTYQQHEALRARRIDLGIVRSPLLETGYATECLVREPFVLAVPAGHPLASAET 181
            +   EMNT +Q   L    +D+G++R+  L        +V EP +  +P  HPLA+   
Sbjct: 124 HLQTREMNTREQIAPLIEGTLDMGLLRNTALPESLEHAVIVHEPLMAMIPHDHPLANNPN 183

Query: 182 VSVQDLDAQPFLMYS-HAAYPPFNELLTGMLRSARVAPQFVQWLGSSLTILALVNAGMGL 240
           V++ +L  +PF+ +  H     ++++L G++R   + P   Q +G ++TI+ LV+AG+G+
Sbjct: 184 VTLAELAKEPFVFFDPHVGTGLYDDIL-GLMRRYHLTPVITQEVGEAMTIIGLVSAGLGV 242

Query: 241 ALVPRCASSVVFKQVVFREIDLGEGVQSELHLVWRQDND 279
           +++P     V   ++ +  I   E   SE+ LVW + ++
Sbjct: 243 SILPASFKRVQLNEMRWVPI-AEEDAVSEMWLVWPKHHE 280